Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lig3P97386 Gm13454-201ENSMUST00000118166 483 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm14835-201ENSMUST00000119039 315 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm12578-201ENSMUST00000121244 417 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm26020-201ENSMUST00000122729 183 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm25807-201ENSMUST00000122783 305 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lig3P97386 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.7□□□□□ -1.82
Lig3P97386 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.7□□□□□ -1.82
Lig3P97386 Gm9892-201ENSMUST00000182415 992 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm20811-201ENSMUST00000190500 553 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm28155-201ENSMUST00000191066 151 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.7□□□□□ -1.82
Lig3P97386 Gm5983-201ENSMUST00000197739 770 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.7□□□□□ -1.82
Lig3P97386 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Gm8423-201ENSMUST00000211387 607 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lig3P97386 Gm7540-201ENSMUST00000219764 926 ntBASIC3.7□□□□□ -1.82
Lig3P97386 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.7□□□□□ -1.82
Lig3P97386 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.7□□□□□ -1.82
Lig3P97386 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lig3P97386 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lig3P97386 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lig3P97386 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Lig3P97386 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lig3P97386 Gm23097-201ENSMUST00000083448 105 ntBASIC3.7□□□□□ -1.82
Lig3P97386 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lig3P97386 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lig3P97386 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.7□□□□□ -1.82
Lig3P97386 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lig3P97386 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lig3P97386 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lig3P97386 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lig3P97386 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lig3P97386 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lig3P97386 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lig3P97386 Gm14622-201ENSMUST00000117117 468 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm12793-201ENSMUST00000119268 292 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm15113-201ENSMUST00000119280 836 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm14570-201ENSMUST00000119444 391 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm11512-201ENSMUST00000119669 663 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm12858-201ENSMUST00000121913 208 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm15466-201ENSMUST00000122299 333 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Mir6916-201ENSMUST00000184514 63 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm29064-201ENSMUST00000187014 813 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm29216-201ENSMUST00000187117 492 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.69□□□□□ -1.82
Lig3P97386 Trbv24-201ENSMUST00000194614 347 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm43954-201ENSMUST00000204634 544 ntBASIC3.69□□□□□ -1.82
Lig3P97386 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.69□□□□□ -1.82
Lig3P97386 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.69□□□□□ -1.82
Lig3P97386 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lig3P97386 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lig3P97386 Gm25578-201ENSMUST00000083406 104 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Gm24765-201ENSMUST00000083691 103 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Lig3P97386 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.69□□□□□ -1.82
Lig3P97386 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lig3P97386 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.69□□□□□ -1.82
Lig3P97386 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.69□□□□□ -1.82
Lig3P97386 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lig3P97386 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lig3P97386 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm25097-201ENSMUST00000104042 145 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lig3P97386 Gm14670-201ENSMUST00000117327 337 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm12386-201ENSMUST00000117380 688 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm12935-201ENSMUST00000119352 246 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lig3P97386 Gm15244-201ENSMUST00000121122 130 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm11438-201ENSMUST00000121582 189 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm12819-201ENSMUST00000122223 629 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lig3P97386 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm25334-201ENSMUST00000158036 110 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm23028-201ENSMUST00000158773 265 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm16101-201ENSMUST00000160695 430 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Cfap61-214ENSMUST00000167179 183 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm24019-201ENSMUST00000178620 107 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm26243-201ENSMUST00000179260 107 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm27676-201ENSMUST00000183669 61 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm27648-201ENSMUST00000184315 107 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.68□□□□□ -1.82
Lig3P97386 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lig3P97386 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lig3P97386 Gm37889-201ENSMUST00000194174 251 ntBASIC3.68□□□□□ -1.82
Lig3P97386 Gm9227-201ENSMUST00000194733 566 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms