Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.72□□□□□ -1.97
Cux1P53564 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Cux1P53564 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Cux1P53564 Gm14882-201ENSMUST00000117216 218 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Gm16490-201ENSMUST00000165299 351 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Gm17161-201ENSMUST00000169187 524 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Cux1P53564 Gm29597-201ENSMUST00000188035 308 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Gm44607-201ENSMUST00000205611 1090 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Gm44938-201ENSMUST00000208614 427 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Olfr815-201ENSMUST00000071557 951 ntBASIC2.71□□□□□ -1.98
Cux1P53564 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Cux1P53564 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Cux1P53564 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
Cux1P53564 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.7□□□□□ -1.98
Cux1P53564 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Cux1P53564 Gm24096-201ENSMUST00000103905 110 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm15106-201ENSMUST00000119691 821 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm7209-201ENSMUST00000122339 333 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.7□□□□□ -1.98
Cux1P53564 Gm5929-201ENSMUST00000166883 487 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm23967-201ENSMUST00000175062 78 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm36994-201ENSMUST00000192941 492 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Cux1P53564 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Cux1P53564 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Cux1P53564 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.7□□□□□ -1.98
Cux1P53564 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.7□□□□□ -1.98
Cux1P53564 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.7□□□□□ -1.98
Cux1P53564 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.7□□□□□ -1.98
Cux1P53564 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm12803-201ENSMUST00000118907 821 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm12926-201ENSMUST00000121158 409 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm22519-201ENSMUST00000158270 178 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm22716-201ENSMUST00000177596 107 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm37778-201ENSMUST00000191732 190 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.69□□□□□ -1.98
Cux1P53564 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Gm22245-201ENSMUST00000082479 103 ntBASIC2.69□□□□□ -1.98
Cux1P53564 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Cux1P53564 Gm11890-201ENSMUST00000119585 417 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Gm15065-201ENSMUST00000121699 273 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Cux1P53564 Gm17065-201ENSMUST00000165245 239 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Gm29167-201ENSMUST00000190024 377 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.68□□□□□ -1.98
Cux1P53564 Gm45063-201ENSMUST00000203726 472 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.68□□□□□ -1.98
Cux1P53564 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Cux1P53564 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Cux1P53564 Mir320-201ENSMUST00000083594 82 ntBASIC2.68□□□□□ -1.98
Cux1P53564 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Cux1P53564 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Cux1P53564 Gm15896-201ENSMUST00000118045 440 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Gm14927-201ENSMUST00000120283 454 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.68□□□□□ -1.98
Cux1P53564 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.68□□□□□ -1.98
Cux1P53564 Gm5309-201ENSMUST00000197416 677 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Gm43198-201ENSMUST00000200927 326 ntBASIC2.68□□□□□ -1.98
Cux1P53564 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.68□□□□□ -1.98
Cux1P53564 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.68□□□□□ -1.98
Cux1P53564 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Cux1P53564 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Cux1P53564 Mir301b-201ENSMUST00000102333 97 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Cux1P53564 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Gm24061-201ENSMUST00000157489 120 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Gm23583-201ENSMUST00000158533 289 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Cux1P53564 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.67□□□□□ -1.98
Cux1P53564 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Cux1P53564 Gm26181-201ENSMUST00000157687 106 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Gm23505-201ENSMUST00000158989 130 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Gm9613-201ENSMUST00000171662 196 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Gm24656-201ENSMUST00000177548 132 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Mir8119-201ENSMUST00000183371 129 ntBASIC2.66□□□□□ -1.98
Cux1P53564 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms