Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm25316-201ENSMUST00000116826 118 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm13650-201ENSMUST00000117729 433 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm23463-201ENSMUST00000122468 99 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm24784-201ENSMUST00000157640 62 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm24240-201ENSMUST00000157785 135 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm25902-201ENSMUST00000158493 318 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Shmt1P50431 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm23660-201ENSMUST00000178362 79 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm24088-201ENSMUST00000179100 79 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm25361-201ENSMUST00000179358 76 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm22621-201ENSMUST00000179678 74 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm10292-201ENSMUST00000183142 581 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm42621-201ENSMUST00000198114 275 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.18□□□□□ -1.74
Shmt1P50431 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.18□□□□□ -1.74
Shmt1P50431 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Shmt1P50431 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Shmt1P50431 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Shmt1P50431 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Shmt1P50431 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Shmt1P50431 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Shmt1P50431 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Shmt1P50431 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.18□□□□□ -1.74
Shmt1P50431 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Shmt1P50431 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.18□□□□□ -1.74
Shmt1P50431 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
Shmt1P50431 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Shmt1P50431 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Shmt1P50431 Mir690-201ENSMUST00000102110 109 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Mir466b-8-201ENSMUST00000103883 86 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm23271-201ENSMUST00000104052 124 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm26273-201ENSMUST00000104180 131 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm13510-201ENSMUST00000118659 429 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm15112-201ENSMUST00000120152 860 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Shmt1P50431 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm24504-201ENSMUST00000157679 100 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm24014-201ENSMUST00000157728 157 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm24898-201ENSMUST00000158133 106 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm22889-201ENSMUST00000158639 58 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.17□□□□□ -1.74
Shmt1P50431 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.17□□□□□ -1.74
Shmt1P50431 Mir5099-201ENSMUST00000175257 74 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm27773-201ENSMUST00000184087 78 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Shmt1P50431 Mir466e-201ENSMUST00000198862 84 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm44063-201ENSMUST00000203307 376 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm6012-201ENSMUST00000210821 730 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Shmt1P50431 Gm23406-201ENSMUST00000082537 122 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Shmt1P50431 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.17□□□□□ -1.74
Shmt1P50431 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Shmt1P50431 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
Shmt1P50431 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Shmt1P50431 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Shmt1P50431 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Shmt1P50431 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
Shmt1P50431 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Shmt1P50431 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Shmt1P50431 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Shmt1P50431 Gm26418-201ENSMUST00000104275 137 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm13511-201ENSMUST00000121167 363 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.16□□□□□ -1.74
Shmt1P50431 Gm24780-201ENSMUST00000157635 143 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.16□□□□□ -1.74
Shmt1P50431 Mir713-201ENSMUST00000178651 108 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm24713-201ENSMUST00000178850 107 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm25448-201ENSMUST00000180065 107 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.16□□□□□ -1.74
Shmt1P50431 Gm27828-201ENSMUST00000184108 119 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm28163-201ENSMUST00000187099 325 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm28717-201ENSMUST00000189950 315 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm19366-201ENSMUST00000206996 156 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.16□□□□□ -1.74
Shmt1P50431 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Shmt1P50431 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Shmt1P50431 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.16□□□□□ -1.74
Shmt1P50431 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Shmt1P50431 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Shmt1P50431 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.15□□□□□ -1.74
Shmt1P50431 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Shmt1P50431 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Shmt1P50431 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms