Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm42537-201ENSMUST00000198260 2574 ntBASIC1.77□□□□□ -2.13
HttP42859 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HttP42859 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC1.77□□□□□ -2.13
HttP42859 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.77□□□□□ -2.13
HttP42859 Gm24313-201ENSMUST00000082561 133 ntBASIC1.77□□□□□ -2.13
HttP42859 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.77□□□□□ -2.13
HttP42859 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.77□□□□□ -2.13
HttP42859 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HttP42859 Gm12721-201ENSMUST00000120621 268 ntBASIC1.77□□□□□ -2.13
HttP42859 AC154329.2-201ENSMUST00000225257 383 ntBASIC1.77□□□□□ -2.13
HttP42859 Gm25279-201ENSMUST00000122608 133 ntBASIC1.76□□□□□ -2.13
HttP42859 Gm43494-201ENSMUST00000197672 388 ntBASIC1.76□□□□□ -2.13
HttP42859 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
HttP42859 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
HttP42859 Gm44897-201ENSMUST00000206187 1341 ntBASIC1.76□□□□□ -2.13
HttP42859 Gm13273-201ENSMUST00000119737 159 ntBASIC1.76□□□□□ -2.13
HttP42859 Gm11556-201ENSMUST00000120751 288 ntBASIC1.76□□□□□ -2.13
HttP42859 Gm24381-201ENSMUST00000122697 104 ntBASIC1.76□□□□□ -2.13
HttP42859 Gm37966-201ENSMUST00000193122 326 ntBASIC1.76□□□□□ -2.13
HttP42859 Mir219b-201ENSMUST00000198317 65 ntBASIC1.76□□□□□ -2.13
HttP42859 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.76□□□□□ -2.13
HttP42859 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.76□□□□□ -2.13
HttP42859 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HttP42859 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HttP42859 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC1.75□□□□□ -2.13
HttP42859 Gm22389-201ENSMUST00000158193 301 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm27535-201ENSMUST00000183814 157 ntBASIC1.75□□□□□ -2.13
HttP42859 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.75□□□□□ -2.13
HttP42859 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC1.75□□□□□ -2.13
HttP42859 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC1.75□□□□□ -2.13
HttP42859 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HttP42859 Gm11248-201ENSMUST00000119568 201 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm5646-201ENSMUST00000120568 714 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm19791-201ENSMUST00000180398 859 ntBASIC1.75□□□□□ -2.13
HttP42859 Mir8118-201ENSMUST00000183962 129 ntBASIC1.75□□□□□ -2.13
HttP42859 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HttP42859 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm25416-201ENSMUST00000104221 107 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm13082-201ENSMUST00000118877 561 ntBASIC1.75□□□□□ -2.13
HttP42859 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.75□□□□□ -2.13
HttP42859 Gm38217-201ENSMUST00000194358 910 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm42834-201ENSMUST00000196845 256 ntBASIC1.75□□□□□ -2.13
HttP42859 Gm43723-201ENSMUST00000196886 189 ntBASIC1.75□□□□□ -2.13
HttP42859 AC158631.1-201ENSMUST00000219202 138 ntBASIC1.75□□□□□ -2.13
HttP42859 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.75□□□□□ -2.13
HttP42859 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HttP42859 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.75□□□□□ -2.13
HttP42859 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HttP42859 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HttP42859 Gm13755-201ENSMUST00000118509 305 ntBASIC1.74□□□□□ -2.13
HttP42859 Gm28383-201ENSMUST00000187563 139 ntBASIC1.74□□□□□ -2.13
HttP42859 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.74□□□□□ -2.13
HttP42859 Gm29262-201ENSMUST00000190084 196 ntBASIC1.74□□□□□ -2.13
HttP42859 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HttP42859 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.74□□□□□ -2.13
HttP42859 AC165415.1-201ENSMUST00000228924 273 ntBASIC1.74□□□□□ -2.13
HttP42859 Gm6429-201ENSMUST00000117144 475 ntBASIC1.74□□□□□ -2.13
HttP42859 Gm14559-201ENSMUST00000121745 496 ntBASIC1.74□□□□□ -2.13
HttP42859 Gm6112-201ENSMUST00000208037 629 ntBASIC1.74□□□□□ -2.13
HttP42859 Gm6012-201ENSMUST00000210821 730 ntBASIC1.74□□□□□ -2.13
HttP42859 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.74□□□□□ -2.13
HttP42859 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.74□□□□□ -2.13
HttP42859 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HttP42859 Gm23636-201ENSMUST00000175070 95 ntBASIC1.73□□□□□ -2.13
HttP42859 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.73□□□□□ -2.13
HttP42859 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.73□□□□□ -2.13
HttP42859 AC132260.2-201ENSMUST00000224482 344 ntBASIC1.73□□□□□ -2.13
HttP42859 Gm22740-201ENSMUST00000083439 109 ntBASIC1.73□□□□□ -2.13
HttP42859 Gm37387-201ENSMUST00000192201 1806 ntBASIC1.73□□□□□ -2.13
HttP42859 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HttP42859 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC1.73□□□□□ -2.13
HttP42859 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HttP42859 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HttP42859 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HttP42859 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HttP42859 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.72□□□□□ -2.13
HttP42859 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HttP42859 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HttP42859 Gm23424-201ENSMUST00000103889 110 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm12880-201ENSMUST00000120652 494 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm14982-201ENSMUST00000121102 442 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm22083-201ENSMUST00000157586 102 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm25365-201ENSMUST00000158852 121 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm20648-201ENSMUST00000175815 328 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm37801-201ENSMUST00000194754 274 ntBASIC1.72□□□□□ -2.13
HttP42859 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.72□□□□□ -2.13
HttP42859 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HttP42859 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HttP42859 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HttP42859 Gm12383-201ENSMUST00000120628 760 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm22945-201ENSMUST00000158557 157 ntBASIC1.72□□□□□ -2.13
HttP42859 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC1.72□□□□□ -2.13
HttP42859 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.72□□□□□ -2.13
HttP42859 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HttP42859 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
HttP42859 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
HttP42859 Gm8292-201ENSMUST00000162574 396 ntBASIC1.71□□□□□ -2.14
HttP42859 Gm3102-201ENSMUST00000164236 489 ntBASIC1.71□□□□□ -2.14
HttP42859 Mir7663-201ENSMUST00000183950 61 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms