Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.6□□□□□ -1.99
Sox6P40645 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.6□□□□□ -1.99
Sox6P40645 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sox6P40645 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.6□□□□□ -1.99
Sox6P40645 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.6□□□□□ -1.99
Sox6P40645 Gm45048-201ENSMUST00000207058 429 ntBASIC2.6□□□□□ -1.99
Sox6P40645 Gm45860-201ENSMUST00000212700 334 ntBASIC2.6□□□□□ -1.99
Sox6P40645 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.6□□□□□ -1.99
Sox6P40645 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Sox6P40645 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.6□□□□□ -1.99
Sox6P40645 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Sox6P40645 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sox6P40645 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm14469-201ENSMUST00000118363 202 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm2003-201ENSMUST00000118537 636 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm14566-201ENSMUST00000118915 321 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm14940-201ENSMUST00000119309 495 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm15103-201ENSMUST00000119893 871 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm13443-201ENSMUST00000120770 555 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.59□□□□□ -1.99
Sox6P40645 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.59□□□□□ -1.99
Sox6P40645 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Sox6P40645 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Sox6P40645 Gm37007-201ENSMUST00000194234 319 ntBASIC2.59□□□□□ -1.99
Sox6P40645 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.59□□□□□ -1.99
Sox6P40645 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.59□□□□□ -1.99
Sox6P40645 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.59□□□□□ -1.99
Sox6P40645 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.59□□□□□ -1.99
Sox6P40645 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.59□□□□□ -1.99
Sox6P40645 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.59□□□□□ -1.99
Sox6P40645 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Sox6P40645 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.59□□□□□ -2
Sox6P40645 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.59□□□□□ -2
Sox6P40645 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.58□□□□□ -2
Sox6P40645 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox6P40645 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.58□□□□□ -2
Sox6P40645 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox6P40645 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.58□□□□□ -2
Sox6P40645 Gm14125-201ENSMUST00000113442 680 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox6P40645 Gm11285-201ENSMUST00000118443 322 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm14238-201ENSMUST00000120227 323 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm14129-201ENSMUST00000122436 291 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.58□□□□□ -2
Sox6P40645 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.58□□□□□ -2
Sox6P40645 Gm22322-201ENSMUST00000157151 111 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm23325-201ENSMUST00000157422 129 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm26406-201ENSMUST00000158503 124 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm24876-201ENSMUST00000158780 92 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.58□□□□□ -2
Sox6P40645 Gm2966-201ENSMUST00000166052 481 ntBASIC2.58□□□□□ -2
Sox6P40645 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox6P40645 Gm25360-201ENSMUST00000178786 191 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm27608-201ENSMUST00000184822 162 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm28802-201ENSMUST00000188624 944 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm38149-201ENSMUST00000191943 339 ntBASIC2.58□□□□□ -2
Sox6P40645 Mir703-201ENSMUST00000197105 109 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.58□□□□□ -2
Sox6P40645 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm45226-201ENSMUST00000206602 288 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm45614-201ENSMUST00000209994 721 ntBASIC2.58□□□□□ -2
Sox6P40645 Gm35558-202ENSMUST00000221819 499 ntBASIC2.58□□□□□ -2
Sox6P40645 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.58□□□□□ -2
Sox6P40645 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.58□□□□□ -2
Sox6P40645 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.58□□□□□ -2
Sox6P40645 Mir350-201ENSMUST00000083639 99 ntBASIC2.58□□□□□ -2
Sox6P40645 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox6P40645 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.58□□□□□ -2
Sox6P40645 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Sox6P40645 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm12876-201ENSMUST00000120975 408 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm14982-201ENSMUST00000121102 442 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm12412-201ENSMUST00000121867 328 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm12368-201ENSMUST00000122251 434 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm13424-201ENSMUST00000122301 354 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm23463-201ENSMUST00000122468 99 ntBASIC2.57□□□□□ -2
Sox6P40645 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.57□□□□□ -2
Sox6P40645 Gm17061-201ENSMUST00000163167 499 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm18667-201ENSMUST00000186523 484 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm29576-201ENSMUST00000188020 678 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Sox6P40645 Gm28354-201ENSMUST00000190904 678 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.57□□□□□ -2
Sox6P40645 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.57□□□□□ -2
Sox6P40645 Gm18748-201ENSMUST00000198507 622 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm44720-201ENSMUST00000206076 260 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm44903-201ENSMUST00000206840 130 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm7675-201ENSMUST00000208828 686 ntBASIC2.57□□□□□ -2
Sox6P40645 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.57□□□□□ -2
Sox6P40645 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.57□□□□□ -2
Sox6P40645 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.57□□□□□ -2
Sox6P40645 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.57□□□□□ -2
Sox6P40645 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sox6P40645 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sox6P40645 Gm6030-201ENSMUST00000078768 402 ntBASIC2.57□□□□□ -2
Sox6P40645 Gm25131-201ENSMUST00000082653 151 ntBASIC2.57□□□□□ -2
Sox6P40645 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms