Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm42924-201ENSMUST00000197261 185 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.61□□□□□ -1.83
Traf1P39428 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Gm18488-201ENSMUST00000215082 364 ntBASIC3.61□□□□□ -1.83
Traf1P39428 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.61□□□□□ -1.83
Traf1P39428 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.61□□□□□ -1.83
Traf1P39428 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.61□□□□□ -1.83
Traf1P39428 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Traf1P39428 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Traf1P39428 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.61□□□□□ -1.83
Traf1P39428 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Traf1P39428 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Traf1P39428 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Traf1P39428 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Gm24836-201ENSMUST00000122609 108 ntBASIC3.6□□□□□ -1.83
Traf1P39428 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Traf1P39428 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.6□□□□□ -1.83
Traf1P39428 Gm17119-201ENSMUST00000163943 280 ntBASIC3.6□□□□□ -1.83
Traf1P39428 Gm28002-201ENSMUST00000184832 100 ntBASIC3.6□□□□□ -1.83
Traf1P39428 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.6□□□□□ -1.83
Traf1P39428 Gm43384-201ENSMUST00000200569 637 ntBASIC3.6□□□□□ -1.83
Traf1P39428 Gm44030-201ENSMUST00000204865 432 ntBASIC3.6□□□□□ -1.83
Traf1P39428 Gm45513-201ENSMUST00000210228 376 ntBASIC3.6□□□□□ -1.83
Traf1P39428 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.6□□□□□ -1.83
Traf1P39428 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Traf1P39428 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.6□□□□□ -1.83
Traf1P39428 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.6□□□□□ -1.83
Traf1P39428 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Traf1P39428 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Traf1P39428 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Traf1P39428 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Traf1P39428 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Traf1P39428 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Traf1P39428 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Traf1P39428 Mir1198-201ENSMUST00000116995 121 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm14815-201ENSMUST00000120060 488 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.59□□□□□ -1.83
Traf1P39428 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Traf1P39428 Gm23380-201ENSMUST00000158448 103 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm24019-201ENSMUST00000178620 107 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm26243-201ENSMUST00000179260 107 ntBASIC3.59□□□□□ -1.83
Traf1P39428 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Traf1P39428 Gm37709-201ENSMUST00000195074 600 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm37417-201ENSMUST00000195257 454 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm44050-201ENSMUST00000204263 527 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm45192-201ENSMUST00000206749 283 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm19126-201ENSMUST00000207896 509 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.59□□□□□ -1.83
Traf1P39428 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.59□□□□□ -1.83
Traf1P39428 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.59□□□□□ -1.83
Traf1P39428 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Traf1P39428 Gm23296-201ENSMUST00000082555 107 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Gm24859-201ENSMUST00000082729 107 ntBASIC3.59□□□□□ -1.83
Traf1P39428 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.59□□□□□ -1.83
Traf1P39428 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Traf1P39428 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.59□□□□□ -1.84
Traf1P39428 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Traf1P39428 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Traf1P39428 Gm26002-201ENSMUST00000101915 107 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm25728-201ENSMUST00000104525 159 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm13504-201ENSMUST00000117490 316 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm12213-201ENSMUST00000119924 353 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm13210-201ENSMUST00000121483 273 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm15065-201ENSMUST00000121699 273 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm23886-201ENSMUST00000122684 313 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.58□□□□□ -1.84
Traf1P39428 Gm17054-201ENSMUST00000169811 259 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Mir5129-201ENSMUST00000174938 78 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Zfp950-206ENSMUST00000178819 171 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Mir6541-201ENSMUST00000183649 110 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm8676-201ENSMUST00000184206 637 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Mir6405-201ENSMUST00000184584 124 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm28666-201ENSMUST00000186649 274 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm28650-201ENSMUST00000188413 411 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm28802-201ENSMUST00000188624 944 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.58□□□□□ -1.84
Traf1P39428 Gm37599-201ENSMUST00000193067 489 ntBASIC3.58□□□□□ -1.84
Traf1P39428 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.58□□□□□ -1.84
Traf1P39428 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.58□□□□□ -1.84
Traf1P39428 Gm44125-201ENSMUST00000203068 448 ntBASIC3.58□□□□□ -1.84
Traf1P39428 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.58□□□□□ -1.84
Traf1P39428 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.58□□□□□ -1.84
Traf1P39428 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.58□□□□□ -1.84
Traf1P39428 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms