Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm29192-201ENSMUST00000190942 377 ntBASIC2.58□□□□□ -2
P20040 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
P20040 Gm44657-201ENSMUST00000208568 450 ntBASIC2.58□□□□□ -2
P20040 Gm44554-201ENSMUST00000208738 147 ntBASIC2.58□□□□□ -2
P20040 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.58□□□□□ -2
P20040 Gm23733-201ENSMUST00000083750 106 ntBASIC2.58□□□□□ -2
P20040 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
P20040 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
P20040 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
P20040 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.58□□□□□ -2
P20040 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.58□□□□□ -2
P20040 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
P20040 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
P20040 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.57□□□□□ -2
P20040 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
P20040 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
P20040 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.57□□□□□ -2
P20040 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.57□□□□□ -2
P20040 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.57□□□□□ -2
P20040 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
P20040 Gm11253-201ENSMUST00000118486 201 ntBASIC2.57□□□□□ -2
P20040 Gm13541-201ENSMUST00000119519 283 ntBASIC2.57□□□□□ -2
P20040 Gm11456-201ENSMUST00000121070 256 ntBASIC2.57□□□□□ -2
P20040 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.57□□□□□ -2
P20040 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.57□□□□□ -2
P20040 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.57□□□□□ -2
P20040 Gm17119-201ENSMUST00000163943 280 ntBASIC2.57□□□□□ -2
P20040 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.57□□□□□ -2
P20040 Mir5129-201ENSMUST00000174938 78 ntBASIC2.57□□□□□ -2
P20040 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
P20040 Mir6338-201ENSMUST00000183389 109 ntBASIC2.57□□□□□ -2
P20040 Gm27676-201ENSMUST00000183669 61 ntBASIC2.57□□□□□ -2
P20040 Mir8103-201ENSMUST00000183945 107 ntBASIC2.57□□□□□ -2
P20040 Gm28390-201ENSMUST00000185212 700 ntBASIC2.57□□□□□ -2
P20040 Gm29600-201ENSMUST00000188687 377 ntBASIC2.57□□□□□ -2
P20040 Gm32447-201ENSMUST00000194265 697 ntBASIC2.57□□□□□ -2
P20040 Gm37987-201ENSMUST00000194999 825 ntBASIC2.57□□□□□ -2
P20040 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.57□□□□□ -2
P20040 Gm19147-201ENSMUST00000199622 652 ntBASIC2.57□□□□□ -2
P20040 Gm44332-201ENSMUST00000203712 433 ntBASIC2.57□□□□□ -2
P20040 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.57□□□□□ -2
P20040 Gm45438-201ENSMUST00000210242 564 ntBASIC2.57□□□□□ -2
P20040 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.57□□□□□ -2
P20040 Gm46136-201ENSMUST00000214730 565 ntBASIC2.57□□□□□ -2
P20040 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.57□□□□□ -2
P20040 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.57□□□□□ -2
P20040 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.57□□□□□ -2
P20040 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.57□□□□□ -2
P20040 Snora23-201ENSMUST00000082517 184 ntBASIC2.57□□□□□ -2
P20040 Gm23615-201ENSMUST00000082602 65 ntBASIC2.57□□□□□ -2
P20040 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.57□□□□□ -2
P20040 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
P20040 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.56□□□□□ -2
P20040 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
P20040 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.56□□□□□ -2
P20040 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
P20040 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.56□□□□□ -2
P20040 Gm16412-201ENSMUST00000121602 273 ntBASIC2.56□□□□□ -2
P20040 Gm13424-201ENSMUST00000122301 354 ntBASIC2.56□□□□□ -2
P20040 Gm14562-201ENSMUST00000129885 543 ntBASIC2.56□□□□□ -2
P20040 Gm25391-201ENSMUST00000157342 134 ntBASIC2.56□□□□□ -2
P20040 Gm10177-202ENSMUST00000161698 207 ntBASIC2.56□□□□□ -2
P20040 Gm17154-201ENSMUST00000165748 431 ntBASIC2.56□□□□□ -2
P20040 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.56□□□□□ -2
P20040 Gm21893-201ENSMUST00000179119 397 ntBASIC2.56□□□□□ -2
P20040 Mir6541-201ENSMUST00000183649 110 ntBASIC2.56□□□□□ -2
P20040 Gm27520-201ENSMUST00000184872 81 ntBASIC2.56□□□□□ -2
P20040 Gm27700-201ENSMUST00000185003 81 ntBASIC2.56□□□□□ -2
P20040 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.56□□□□□ -2
P20040 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.56□□□□□ -2
P20040 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.56□□□□□ -2
P20040 Gm43384-201ENSMUST00000200569 637 ntBASIC2.56□□□□□ -2
P20040 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.56□□□□□ -2
P20040 Gm44600-201ENSMUST00000208540 111 ntBASIC2.56□□□□□ -2
P20040 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.56□□□□□ -2
P20040 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.56□□□□□ -2
P20040 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.56□□□□□ -2
P20040 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.56□□□□□ -2
P20040 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.56□□□□□ -2
P20040 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.56□□□□□ -2
P20040 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.56□□□□□ -2
P20040 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
P20040 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.56□□□□□ -2
P20040 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
P20040 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
P20040 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.56□□□□□ -2
P20040 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
P20040 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
P20040 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
P20040 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.55□□□□□ -2
P20040 Gm14448-201ENSMUST00000116383 210 ntBASIC2.55□□□□□ -2
P20040 Gm15110-201ENSMUST00000117545 881 ntBASIC2.55□□□□□ -2
P20040 Gm14751-201ENSMUST00000117693 222 ntBASIC2.55□□□□□ -2
P20040 Gm15936-201ENSMUST00000118706 460 ntBASIC2.55□□□□□ -2
P20040 Gm4732-201ENSMUST00000118778 473 ntBASIC2.55□□□□□ -2
P20040 Gm7071-201ENSMUST00000120458 462 ntBASIC2.55□□□□□ -2
P20040 Gm13443-201ENSMUST00000120770 555 ntBASIC2.55□□□□□ -2
P20040 Gm13210-201ENSMUST00000121483 273 ntBASIC2.55□□□□□ -2
P20040 Gm15065-201ENSMUST00000121699 273 ntBASIC2.55□□□□□ -2
P20040 Gm14411-201ENSMUST00000121798 914 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms