Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.96□□□□□ -1.78
Best1O88870 Gm22098-201ENSMUST00000157930 85 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm17072-201ENSMUST00000166673 658 ntBASIC3.96□□□□□ -1.78
Best1O88870 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Best1O88870 Gm25314-201ENSMUST00000178810 79 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm8296-201ENSMUST00000185597 524 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.96□□□□□ -1.78
Best1O88870 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 Gm44060-201ENSMUST00000204440 410 ntBASIC3.96□□□□□ -1.78
Best1O88870 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 AC147101.1-201ENSMUST00000217964 312 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm19326-201ENSMUST00000219818 326 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 Gm30155-201ENSMUST00000223458 339 ntBASIC3.96□□□□□ -1.78
Best1O88870 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Best1O88870 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Best1O88870 Gm10042-201ENSMUST00000079884 78 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm25257-201ENSMUST00000083907 110 ntBASIC3.96□□□□□ -1.78
Best1O88870 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Best1O88870 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.96□□□□□ -1.78
Best1O88870 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.96□□□□□ -1.78
Best1O88870 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Best1O88870 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.95□□□□□ -1.78
Best1O88870 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Best1O88870 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Best1O88870 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Best1O88870 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Best1O88870 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.95□□□□□ -1.78
Best1O88870 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Best1O88870 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Best1O88870 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Best1O88870 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Best1O88870 Gm23886-201ENSMUST00000122684 313 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm11281-201ENSMUST00000141391 576 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Best1O88870 Gm26320-201ENSMUST00000157742 306 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm22398-201ENSMUST00000174941 125 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm25731-201ENSMUST00000175167 125 ntBASIC3.95□□□□□ -1.78
Best1O88870 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Best1O88870 Gm24168-201ENSMUST00000178825 107 ntBASIC3.95□□□□□ -1.78
Best1O88870 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Best1O88870 Gm4854-201ENSMUST00000185902 574 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm28860-201ENSMUST00000188103 313 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm43304-201ENSMUST00000196803 326 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm43402-201ENSMUST00000197159 159 ntBASIC3.95□□□□□ -1.78
Best1O88870 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Best1O88870 Gm43239-201ENSMUST00000200131 201 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.95□□□□□ -1.78
Best1O88870 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.95□□□□□ -1.78
Best1O88870 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.95□□□□□ -1.78
Best1O88870 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm5374-201ENSMUST00000222868 657 ntBASIC3.95□□□□□ -1.78
Best1O88870 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.95□□□□□ -1.78
Best1O88870 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.95□□□□□ -1.78
Best1O88870 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Best1O88870 Gm3867-201ENSMUST00000086108 279 ntBASIC3.95□□□□□ -1.78
Best1O88870 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Best1O88870 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Best1O88870 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.95□□□□□ -1.78
Best1O88870 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.94□□□□□ -1.78
Best1O88870 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Best1O88870 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Best1O88870 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
Best1O88870 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm14299-201ENSMUST00000117586 397 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm14107-201ENSMUST00000117774 330 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm14861-201ENSMUST00000119451 455 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm11456-201ENSMUST00000121070 256 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.94□□□□□ -1.78
Best1O88870 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC3.94□□□□□ -1.78
Best1O88870 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.94□□□□□ -1.78
Best1O88870 Gm25999-201ENSMUST00000175398 133 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm23725-201ENSMUST00000177876 107 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm28654-201ENSMUST00000189801 379 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm37603-201ENSMUST00000192368 219 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm37523-201ENSMUST00000194901 412 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.94□□□□□ -1.78
Best1O88870 Gm43704-201ENSMUST00000196164 496 ntBASIC3.94□□□□□ -1.78
Best1O88870 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm19908-201ENSMUST00000204684 391 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm44520-201ENSMUST00000205447 802 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm45402-201ENSMUST00000211796 223 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.94□□□□□ -1.78
Best1O88870 Gm17829-201ENSMUST00000219782 344 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.94□□□□□ -1.78
Best1O88870 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.94□□□□□ -1.78
Best1O88870 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.94□□□□□ -1.78
Best1O88870 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.94□□□□□ -1.78
Best1O88870 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms