Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cldn5O54942 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Cldn5O54942 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Cldn5O54942 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cldn5O54942 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cldn5O54942 Gm25539-201ENSMUST00000116886 122 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm12723-201ENSMUST00000120700 451 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm23886-201ENSMUST00000122684 313 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm22718-201ENSMUST00000122701 315 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm24627-201ENSMUST00000122764 138 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm23538-201ENSMUST00000157535 101 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm23380-201ENSMUST00000158448 103 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
Cldn5O54942 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm18448-201ENSMUST00000186286 599 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.16□□□□□ -1.9
Cldn5O54942 Gm29192-201ENSMUST00000190942 377 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.16□□□□□ -1.9
Cldn5O54942 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm45048-201ENSMUST00000207058 429 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Gm46193-201ENSMUST00000219399 364 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cldn5O54942 Gm23615-201ENSMUST00000082602 65 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Mir184-201ENSMUST00000083662 69 ntBASIC3.16□□□□□ -1.9
Cldn5O54942 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Cldn5O54942 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Cldn5O54942 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Cldn5O54942 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Cldn5O54942 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Cldn5O54942 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.15□□□□□ -1.91
Cldn5O54942 Gm25728-201ENSMUST00000104525 159 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Gm11321-201ENSMUST00000121257 902 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Gm24787-201ENSMUST00000157380 123 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Gm42805-201ENSMUST00000196158 276 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Gm44393-201ENSMUST00000197418 138 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.15□□□□□ -1.91
Cldn5O54942 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Gm9068-201ENSMUST00000217393 455 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.15□□□□□ -1.91
Cldn5O54942 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.15□□□□□ -1.91
Cldn5O54942 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.15□□□□□ -1.91
Cldn5O54942 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cldn5O54942 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Cldn5O54942 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Cldn5O54942 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cldn5O54942 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Cldn5O54942 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cldn5O54942 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.14□□□□□ -1.91
Cldn5O54942 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cldn5O54942 Gm7853-201ENSMUST00000100708 478 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cldn5O54942 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Cldn5O54942 Gm14594-201ENSMUST00000118052 537 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm14590-201ENSMUST00000118934 537 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm13443-201ENSMUST00000120770 555 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm24552-201ENSMUST00000158646 103 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm16588-201ENSMUST00000162889 355 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.14□□□□□ -1.91
Cldn5O54942 Gm25360-201ENSMUST00000178786 191 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm14596-201ENSMUST00000180268 537 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm14595-201ENSMUST00000180335 537 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm28113-201ENSMUST00000188280 229 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm19147-201ENSMUST00000199622 652 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cldn5O54942 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.14□□□□□ -1.91
Cldn5O54942 Gm44212-201ENSMUST00000205016 897 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.14□□□□□ -1.91
Cldn5O54942 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Gm24921-201ENSMUST00000083024 107 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Cldn5O54942 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.14□□□□□ -1.91
Cldn5O54942 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Cldn5O54942 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm23747-201ENSMUST00000104228 131 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm11813-201ENSMUST00000118586 291 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm11598-201ENSMUST00000119257 357 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm14240-201ENSMUST00000120353 546 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm24517-201ENSMUST00000122560 107 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.13□□□□□ -1.91
Cldn5O54942 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.13□□□□□ -1.91
Cldn5O54942 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cldn5O54942 Gm7858-201ENSMUST00000190177 622 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms