Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm15844-201ENSMUST00000118016 576 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm3470-201ENSMUST00000160819 420 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm16326-201ENSMUST00000162843 414 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm19202-201ENSMUST00000198096 808 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm18871-201ENSMUST00000218655 745 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm23723-201ENSMUST00000082996 132 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Hmgb3O54879 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm650-201ENSMUST00000144428 1551 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Hmgb3O54879 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm6574-201ENSMUST00000120037 362 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm4916-201ENSMUST00000126139 642 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm22554-201ENSMUST00000157798 147 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm27520-201ENSMUST00000184872 81 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm29516-201ENSMUST00000190402 468 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm18340-201ENSMUST00000196342 609 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC1.84□□□□□ -2.11
Hmgb3O54879 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm44519-201ENSMUST00000206486 122 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm9373-201ENSMUST00000208724 599 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm18704-201ENSMUST00000219736 446 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm10025-201ENSMUST00000079568 372 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm22978-201ENSMUST00000082607 160 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 n-R5s86-201ENSMUST00000083215 119 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Hmgb3O54879 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.84□□□□□ -2.11
Hmgb3O54879 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.84□□□□□ -2.12
Hmgb3O54879 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Hmgb3O54879 Mir208b-201ENSMUST00000104735 77 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Mir466k-201ENSMUST00000116774 122 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm5287-201ENSMUST00000120666 598 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm24770-201ENSMUST00000158505 92 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Hmgb3O54879 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm29299-201ENSMUST00000185609 923 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm18448-201ENSMUST00000186286 599 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm29573-201ENSMUST00000190291 919 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Hmgb3O54879 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.83□□□□□ -2.12
Hmgb3O54879 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 364.5 ms