Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm46146-201ENSMUST00000217483 346 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Sdc4O35988 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Sdc4O35988 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Sdc4O35988 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc4O35988 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc4O35988 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc4O35988 Gm26154-201ENSMUST00000102339 96 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm14591-201ENSMUST00000120407 518 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm16363-201ENSMUST00000132460 877 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Trav20-201ENSMUST00000142754 347 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm22192-201ENSMUST00000175128 85 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Gm23190-201ENSMUST00000180307 64 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Gm28060-201ENSMUST00000191554 189 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm20915-201ENSMUST00000191575 663 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Trbv18-201ENSMUST00000194256 294 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.14□□□□□ -2.07
Sdc4O35988 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm18617-201ENSMUST00000222311 259 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Sdc4O35988 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Sdc4O35988 Gm22507-201ENSMUST00000082773 160 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 Gm25632-201ENSMUST00000083112 85 ntBASIC2.14□□□□□ -2.07
Sdc4O35988 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc4O35988 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Sdc4O35988 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc4O35988 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.13□□□□□ -2.07
Sdc4O35988 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Sdc4O35988 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc4O35988 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc4O35988 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc4O35988 Gm14008-201ENSMUST00000120483 274 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm14069-201ENSMUST00000120815 229 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm12238-201ENSMUST00000127764 124 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm20450-201ENSMUST00000173652 147 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm27470-201ENSMUST00000184070 210 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm29534-201ENSMUST00000187328 382 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc4O35988 Gm37193-201ENSMUST00000193087 513 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.13□□□□□ -2.07
Sdc4O35988 Gm9375-201ENSMUST00000208899 903 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.13□□□□□ -2.07
Sdc4O35988 Gm7588-201ENSMUST00000216866 571 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc4O35988 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sdc4O35988 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.13□□□□□ -2.07
Sdc4O35988 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm15116-201ENSMUST00000122248 663 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc4O35988 Gm22803-201ENSMUST00000158049 283 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.12□□□□□ -2.07
Sdc4O35988 Mir6406-201ENSMUST00000183592 120 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm28169-201ENSMUST00000190342 345 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc4O35988 Gm43582-201ENSMUST00000196149 343 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm31532-201ENSMUST00000203555 767 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Gm18000-201ENSMUST00000212153 800 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.12□□□□□ -2.07
Sdc4O35988 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Sdc4O35988 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm12721-201ENSMUST00000120621 268 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm26345-201ENSMUST00000157534 120 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm25432-201ENSMUST00000158284 66 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Sdc4O35988 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm26915-201ENSMUST00000183080 748 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Mir7016-201ENSMUST00000184308 72 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm17929-201ENSMUST00000186851 627 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm37037-201ENSMUST00000194475 424 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Sdc4O35988 Gm43550-201ENSMUST00000200597 303 ntBASIC2.11□□□□□ -2.07
Sdc4O35988 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.11□□□□□ -2.07
Sdc4O35988 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms