Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm9059-201ENSMUST00000118319 183 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm15313-201ENSMUST00000119179 282 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm6584-201ENSMUST00000119671 447 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm14049-201ENSMUST00000121009 636 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm23214-201ENSMUST00000122716 157 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm24784-201ENSMUST00000157640 62 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm24847-201ENSMUST00000158032 108 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm22534-201ENSMUST00000158173 104 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm23152-201ENSMUST00000175322 116 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm6625-201ENSMUST00000177870 272 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm27385-201ENSMUST00000184747 104 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm28399-201ENSMUST00000186221 318 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm28572-201ENSMUST00000187444 318 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm29365-201ENSMUST00000189461 699 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm37670-201ENSMUST00000193622 229 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm44989-201ENSMUST00000204749 217 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm44703-201ENSMUST00000205724 248 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm45614-201ENSMUST00000209994 721 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm23518-201ENSMUST00000082835 153 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm10242-201ENSMUST00000090064 330 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Shisa8J3QNX5 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm11625-201ENSMUST00000119535 296 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm14101-201ENSMUST00000121502 473 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm11229-201ENSMUST00000121993 437 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm25177-201ENSMUST00000122634 117 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm24059-201ENSMUST00000157493 312 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm23312-201ENSMUST00000158774 102 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm25369-201ENSMUST00000158848 132 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm26180-201ENSMUST00000179942 107 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm26866-201ENSMUST00000180414 802 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm27445-201ENSMUST00000184484 72 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm28163-201ENSMUST00000187099 325 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm29479-201ENSMUST00000190352 455 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm28408-201ENSMUST00000191557 463 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm37692-201ENSMUST00000192633 232 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm37732-201ENSMUST00000194377 316 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm43559-201ENSMUST00000198755 466 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm7675-201ENSMUST00000208828 686 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm46193-201ENSMUST00000219399 364 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm26228-201ENSMUST00000082512 107 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm25080-201ENSMUST00000082526 107 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm25518-201ENSMUST00000083864 107 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm26107-201ENSMUST00000083972 107 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shisa8J3QNX5 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shisa8J3QNX5 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms