Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Gm27894-201ENSMUST00000184177 92 ntBASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Mir6950-201ENSMUST00000184438 73 ntBASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc180J3QNE4 Gm25051-201ENSMUST00000158602 249 ntBASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 Gm26082-201ENSMUST00000104070 127 ntBASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 Gm26181-201ENSMUST00000157687 106 ntBASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.04□□□□□ -1.92
Ccdc180J3QNE4 Gm43960-201ENSMUST00000204249 5020 ntBASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm13714-201ENSMUST00000117313 221 ntBASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.03□□□□□ -1.92
Ccdc180J3QNE4 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc180J3QNE4 Gm15526-201ENSMUST00000112504 204 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm14880-201ENSMUST00000117581 292 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm24572-201ENSMUST00000175505 88 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm37119-201ENSMUST00000195691 389 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm6059-201ENSMUST00000196903 340 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm22116-201ENSMUST00000158791 141 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Mir6379-201ENSMUST00000183392 115 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm37281-201ENSMUST00000192412 439 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm43070-201ENSMUST00000196938 415 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm43406-201ENSMUST00000200356 334 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc180J3QNE4 Gm5937-201ENSMUST00000119715 643 ntBASIC3□□□□□ -1.93
Ccdc180J3QNE4 Gm15115-201ENSMUST00000121145 264 ntBASIC3□□□□□ -1.93
Ccdc180J3QNE4 Gm2878-201ENSMUST00000170173 486 ntBASIC3□□□□□ -1.93
Ccdc180J3QNE4 Gm44490-201ENSMUST00000198566 127 ntBASIC3□□□□□ -1.93
Ccdc180J3QNE4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc180J3QNE4 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.99□□□□□ -1.93
Ccdc180J3QNE4 Gm15714-201ENSMUST00000117168 250 ntBASIC2.99□□□□□ -1.93
Ccdc180J3QNE4 Gm42465-201ENSMUST00000197036 492 ntBASIC2.99□□□□□ -1.93
Ccdc180J3QNE4 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.99□□□□□ -1.93
Ccdc180J3QNE4 Snora33-201ENSMUST00000093556 129 ntBASIC2.99□□□□□ -1.93
Ccdc180J3QNE4 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Mir301b-201ENSMUST00000102333 97 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Mir8119-201ENSMUST00000183371 129 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm2066-201ENSMUST00000118046 389 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm2288-201ENSMUST00000118560 638 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm2318-201ENSMUST00000119623 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7438-201ENSMUST00000177664 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7408-201ENSMUST00000178014 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7386-201ENSMUST00000178020 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm3657-201ENSMUST00000178170 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7415-201ENSMUST00000178205 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7398-201ENSMUST00000178589 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7391-201ENSMUST00000178680 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm2092-201ENSMUST00000178887 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm7375-201ENSMUST00000179232 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm2759-201ENSMUST00000179938 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm3681-201ENSMUST00000179940 639 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Gm29553-201ENSMUST00000189692 279 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.98□□□□□ -1.93
Ccdc180J3QNE4 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc180J3QNE4 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc180J3QNE4 Gm22673-201ENSMUST00000104415 131 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms