Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm23191-201ENSMUST00000179147 107 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm26180-201ENSMUST00000179942 107 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Mir6375-201ENSMUST00000197176 95 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm42451-201ENSMUST00000197410 244 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm44016-201ENSMUST00000203463 164 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm19126-201ENSMUST00000207896 509 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm16419-201ENSMUST00000221057 625 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm26121-201ENSMUST00000083364 162 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm25581-201ENSMUST00000083410 164 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.54□□□□□ -1.84
H2afb3S4R1G7 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
H2afb3S4R1G7 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm24951-201ENSMUST00000102182 109 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm23256-201ENSMUST00000102235 110 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm26140-201ENSMUST00000103807 110 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm14816-201ENSMUST00000117174 294 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm11813-201ENSMUST00000118586 291 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm14119-201ENSMUST00000119511 235 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm13409-201ENSMUST00000122072 546 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm16060-201ENSMUST00000153140 478 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm24857-201ENSMUST00000158061 310 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm15914-201ENSMUST00000161922 309 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm17148-201ENSMUST00000164702 249 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm24811-201ENSMUST00000175313 100 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm22908-201ENSMUST00000177620 110 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm21726-201ENSMUST00000179654 392 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm26866-201ENSMUST00000180414 802 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm27490-201ENSMUST00000184754 128 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm28385-201ENSMUST00000185671 292 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm28399-201ENSMUST00000186221 318 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm28572-201ENSMUST00000187444 318 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm29365-201ENSMUST00000189461 699 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm38270-201ENSMUST00000192721 407 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm44059-201ENSMUST00000204048 351 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm4045-201ENSMUST00000204076 310 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm17989-201ENSMUST00000211543 412 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Gm18441-201ENSMUST00000223539 617 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb3S4R1G7 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
H2afb3S4R1G7 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
H2afb3S4R1G7 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.53□□□□□ -1.85
H2afb3S4R1G7 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
H2afb3S4R1G7 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
H2afb3S4R1G7 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms