Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm5215-201ENSMUST00000054380 405 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm10916-201ENSMUST00000080330 483 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm23302-201ENSMUST00000082710 100 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm650-201ENSMUST00000144428 1551 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm14537-201ENSMUST00000117464 599 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm13457-201ENSMUST00000117885 267 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm6265-201ENSMUST00000149263 231 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm24348-201ENSMUST00000158710 130 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm22348-201ENSMUST00000178674 79 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 LOC667541-201ENSMUST00000223408 278 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm22973-201ENSMUST00000083298 191 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm36989-201ENSMUST00000193225 2160 ntBASIC5.31□□□□□ -1.56
Prpf40aQ9R1C7 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm12261-201ENSMUST00000117499 645 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm8129-201ENSMUST00000118230 213 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm13873-201ENSMUST00000119208 427 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm14768-201ENSMUST00000122126 678 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm25383-201ENSMUST00000157810 144 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm22433-201ENSMUST00000158550 142 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Scarna6-201ENSMUST00000158656 265 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm9402-201ENSMUST00000196849 388 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm32536-201ENSMUST00000205209 445 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm7117-201ENSMUST00000071515 387 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm25411-201ENSMUST00000083760 151 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Gm23041-201ENSMUST00000083868 106 ntBASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Prpf40aQ9R1C7 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm7853-201ENSMUST00000100708 478 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm15553-201ENSMUST00000118757 430 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm11384-201ENSMUST00000121376 303 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm14559-201ENSMUST00000121745 496 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm13424-201ENSMUST00000122301 354 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm23752-201ENSMUST00000157584 115 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm23121-201ENSMUST00000157653 173 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm20397-201ENSMUST00000174520 362 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm27477-201ENSMUST00000184649 143 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm10092-201ENSMUST00000077110 180 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Gm43320-201ENSMUST00000196047 2916 ntBASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Prpf40aQ9R1C7 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Gm23836-201ENSMUST00000104434 129 ntBASIC5.28□□□□□ -1.56
Prpf40aQ9R1C7 Mir881-201ENSMUST00000104844 78 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms