Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm38149-201ENSMUST00000191943 339 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm37007-201ENSMUST00000194234 319 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm31520-201ENSMUST00000203048 733 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm18252-203ENSMUST00000215855 757 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm19219-201ENSMUST00000215863 724 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm25008-201ENSMUST00000083809 81 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Igkv11-106-201ENSMUST00000103331 346 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm23530-201ENSMUST00000104564 137 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm14987-201ENSMUST00000117820 676 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm14101-201ENSMUST00000121502 473 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm24911-201ENSMUST00000157292 136 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm24546-201ENSMUST00000158652 102 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm17038-201ENSMUST00000166586 494 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Mir5099-201ENSMUST00000175257 74 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm26061-201ENSMUST00000175584 108 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm20673-201ENSMUST00000177167 430 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm28744-201ENSMUST00000189939 340 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm2189-201ENSMUST00000201419 429 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm44478-201ENSMUST00000204875 114 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm45539-201ENSMUST00000210313 428 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm45860-201ENSMUST00000212700 334 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm18729-201ENSMUST00000217230 621 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm2710-201ENSMUST00000073196 603 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm26055-201ENSMUST00000083038 107 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Gm23650-201ENSMUST00000083355 70 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trem1Q9JKE2 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Trem1Q9JKE2 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm23948-201ENSMUST00000104030 132 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm24126-201ENSMUST00000104111 106 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm12016-201ENSMUST00000119079 681 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm13406-201ENSMUST00000121991 256 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm25283-201ENSMUST00000157272 77 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm22726-201ENSMUST00000158089 179 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm16285-201ENSMUST00000162999 347 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm3025-201ENSMUST00000163454 489 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm2878-201ENSMUST00000170173 486 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm27783-201ENSMUST00000183534 105 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Mir8096-201ENSMUST00000184526 127 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm28169-201ENSMUST00000190342 345 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trem1Q9JKE2 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm35570-201ENSMUST00000198730 681 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm43899-201ENSMUST00000203675 246 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm44295-201ENSMUST00000203805 437 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm29754-201ENSMUST00000206269 358 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm3442-201ENSMUST00000216808 710 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm40598-201ENSMUST00000222953 547 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.58□□□□□ -2
Trem1Q9JKE2 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trem1Q9JKE2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trem1Q9JKE2 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.58□□□□□ -2
Trem1Q9JKE2 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms