Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.86□□□□□ -2.11
Trem3Q9JKE1 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.86□□□□□ -2.11
Trem3Q9JKE1 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.86□□□□□ -2.11
Trem3Q9JKE1 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trem3Q9JKE1 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trem3Q9JKE1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm6913-201ENSMUST00000100019 348 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm14020-201ENSMUST00000118165 662 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm16017-201ENSMUST00000119834 208 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm12443-201ENSMUST00000122308 323 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm2830-201ENSMUST00000140330 385 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm7346-201ENSMUST00000169661 476 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Mir3965-201ENSMUST00000175570 69 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm5224-201ENSMUST00000183060 350 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29299-201ENSMUST00000185609 923 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29452-201ENSMUST00000187996 313 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm28860-201ENSMUST00000188103 313 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29573-201ENSMUST00000190291 919 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Ighv8-1-201ENSMUST00000194897 291 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm42474-201ENSMUST00000201073 505 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 AC150560.3-201ENSMUST00000227442 455 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm26439-201ENSMUST00000082592 106 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trem3Q9JKE1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm26154-201ENSMUST00000102339 96 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm13640-201ENSMUST00000118445 264 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm9225-201ENSMUST00000121921 836 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Gm12368-201ENSMUST00000122251 434 ntBASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trem3Q9JKE1 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms