Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim54Q9ERP3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim54Q9ERP3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Trim54Q9ERP3 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.84□□□□□ -1.8
Trim54Q9ERP3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Trim54Q9ERP3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm14811-201ENSMUST00000117070 117 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm14973-201ENSMUST00000117248 255 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm13650-201ENSMUST00000117729 433 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm5762-201ENSMUST00000119204 258 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm13155-201ENSMUST00000119277 646 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm11522-201ENSMUST00000120533 176 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm8178-201ENSMUST00000121570 646 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm13419-201ENSMUST00000121711 271 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm23123-201ENSMUST00000157648 144 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm24730-201ENSMUST00000158228 117 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm24727-201ENSMUST00000158231 144 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm17119-201ENSMUST00000163943 280 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm27313-201ENSMUST00000183500 142 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm27599-201ENSMUST00000183758 174 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm5116-201ENSMUST00000187732 463 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm29627-201ENSMUST00000187984 463 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm28151-201ENSMUST00000189404 951 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm44703-201ENSMUST00000205724 248 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm22508-201ENSMUST00000082772 110 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm22229-201ENSMUST00000082987 108 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.83□□□□□ -1.8
Trim54Q9ERP3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm14906-201ENSMUST00000119265 390 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm22597-201ENSMUST00000157602 80 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm25163-201ENSMUST00000158905 104 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm4761-201ENSMUST00000178086 582 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm24100-201ENSMUST00000178592 79 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm24137-201ENSMUST00000180055 79 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm21729-201ENSMUST00000180058 664 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm21853-201ENSMUST00000180071 664 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm22391-201ENSMUST00000180356 79 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm27660-201ENSMUST00000184028 208 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm29495-201ENSMUST00000189319 664 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm44513-201ENSMUST00000206811 439 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm9762-201ENSMUST00000036976 444 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm9765-201ENSMUST00000043170 321 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim54Q9ERP3 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm23697-201ENSMUST00000103897 110 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm15443-201ENSMUST00000118947 820 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm12640-201ENSMUST00000120097 310 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm15112-201ENSMUST00000120152 860 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm15147-201ENSMUST00000122263 483 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm17538-201ENSMUST00000168236 327 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm22290-201ENSMUST00000177655 107 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm22583-201ENSMUST00000178031 107 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm27028-201ENSMUST00000182303 399 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm18956-201ENSMUST00000192857 480 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm37119-201ENSMUST00000195691 389 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm42832-201ENSMUST00000196361 745 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm44016-201ENSMUST00000203463 164 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm35876-201ENSMUST00000205044 459 ntBASIC3.81□□□□□ -1.8
Trim54Q9ERP3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.81□□□□□ -1.8
Trim54Q9ERP3 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms