Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm10025-201ENSMUST00000079568 372 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm23296-201ENSMUST00000082555 107 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm26439-201ENSMUST00000082592 106 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm24859-201ENSMUST00000082729 107 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm13913-201ENSMUST00000121126 260 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm16021-201ENSMUST00000121176 219 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm12155-201ENSMUST00000121267 160 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm24813-201ENSMUST00000175310 84 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Mir7k-201ENSMUST00000184115 110 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm44393-201ENSMUST00000197418 138 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm44404-201ENSMUST00000203979 636 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm45023-201ENSMUST00000207951 379 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm45879-201ENSMUST00000212521 392 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Lima1Q9ERG0 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.43□□□□□ -2.02
Lima1Q9ERG0 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm24627-201ENSMUST00000122764 138 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm22849-201ENSMUST00000157713 307 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm24958-201ENSMUST00000158009 97 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm25373-201ENSMUST00000158156 115 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm22538-201ENSMUST00000158169 299 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm22764-201ENSMUST00000158370 92 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm22947-201ENSMUST00000158559 91 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm16289-201ENSMUST00000162079 183 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm27379-201ENSMUST00000183730 123 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Trdv3-201ENSMUST00000198551 309 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm43897-201ENSMUST00000204019 309 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Lima1Q9ERG0 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Mir466k-201ENSMUST00000116774 122 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm2288-201ENSMUST00000118560 638 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm16359-201ENSMUST00000124511 289 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm24546-201ENSMUST00000158652 102 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm23476-201ENSMUST00000158881 274 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Mir6383-201ENSMUST00000184545 116 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm29513-201ENSMUST00000185741 202 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Gm42465-201ENSMUST00000197036 492 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Lima1Q9ERG0 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Lima1Q9ERG0 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.41□□□□□ -2.02
Lima1Q9ERG0 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Lima1Q9ERG0 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.41□□□□□ -2.02
Lima1Q9ERG0 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm23175-201ENSMUST00000104371 132 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm14517-201ENSMUST00000119040 337 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm14736-201ENSMUST00000121470 336 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm23642-201ENSMUST00000157858 258 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm43070-201ENSMUST00000196938 415 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm43264-201ENSMUST00000202284 325 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm32222-201ENSMUST00000203296 298 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.4□□□□□ -2.03
Lima1Q9ERG0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms