Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm27942-201ENSMUST00000184669 101 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 AF357341-201ENSMUST00000083088 75 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm22829-201ENSMUST00000083771 106 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Scn4aQ9ER60 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm25555-201ENSMUST00000158078 111 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm3489-201ENSMUST00000190083 528 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm43676-201ENSMUST00000197532 540 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm5655-201ENSMUST00000221078 901 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm8121-201ENSMUST00000153583 499 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm27233-201ENSMUST00000184030 307 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm27443-201ENSMUST00000184660 98 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm17929-201ENSMUST00000186851 627 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Scn4aQ9ER60 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm24212-201ENSMUST00000158258 132 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm17061-201ENSMUST00000163167 499 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm25403-201ENSMUST00000082971 143 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Olfr203-201ENSMUST00000089305 924 ntBASIC3.29□□□□□ -1.88
Scn4aQ9ER60 Gm15159-201ENSMUST00000117062 764 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm22339-201ENSMUST00000157718 62 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm23967-201ENSMUST00000175062 78 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm25944-201ENSMUST00000178758 94 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm43142-201ENSMUST00000198670 361 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm10212-201ENSMUST00000087884 324 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm22673-201ENSMUST00000104415 131 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm12814-201ENSMUST00000117091 846 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm3025-201ENSMUST00000163454 489 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm2878-201ENSMUST00000170173 486 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm25412-201ENSMUST00000180258 107 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm3010-201ENSMUST00000198805 448 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.28□□□□□ -1.88
Scn4aQ9ER60 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Scn4aQ9ER60 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms