Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm6969-201ENSMUST00000140065 342 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm26278-201ENSMUST00000157098 132 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm25624-201ENSMUST00000157222 275 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm25835-201ENSMUST00000158917 144 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm8580-201ENSMUST00000160295 464 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm24949-201ENSMUST00000183609 215 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm28591-201ENSMUST00000185259 183 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm44858-201ENSMUST00000207360 154 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.9□□□□□ -1.63
Upf1Q9EPU0 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf1Q9EPU0 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm14657-201ENSMUST00000117461 302 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm24499-201ENSMUST00000158446 104 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm5258-201ENSMUST00000165437 327 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm26195-201ENSMUST00000175035 101 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm26622-201ENSMUST00000180520 298 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Mir8090-201ENSMUST00000185078 136 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm44349-201ENSMUST00000197048 123 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm16419-201ENSMUST00000221057 625 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf1Q9EPU0 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm22023-201ENSMUST00000104354 130 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Mir292-201ENSMUST00000104847 82 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm13664-201ENSMUST00000117304 345 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm24944-201ENSMUST00000158330 128 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm25606-201ENSMUST00000158363 95 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Mir6418-201ENSMUST00000185075 115 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm43424-201ENSMUST00000200484 253 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm44336-201ENSMUST00000203696 468 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm44765-201ENSMUST00000206927 601 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm45730-201ENSMUST00000212560 395 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Upf1Q9EPU0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm12062-201ENSMUST00000117533 259 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm11862-201ENSMUST00000119678 659 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm14287-201ENSMUST00000121060 117 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 AA413626-201ENSMUST00000121125 494 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm15147-201ENSMUST00000122263 483 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm24138-201ENSMUST00000157572 114 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm7241-201ENSMUST00000159853 357 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm32340-201ENSMUST00000192883 259 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Mir691-201ENSMUST00000199719 78 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm44099-201ENSMUST00000203299 112 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm19252-201ENSMUST00000204705 305 ntBASIC4.87□□□□□ -1.63
Upf1Q9EPU0 Gm44927-201ENSMUST00000207573 716 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms