Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm27532-201ENSMUST00000183726 113 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm29460-201ENSMUST00000188607 714 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm7858-201ENSMUST00000190177 622 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm37616-201ENSMUST00000193974 322 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm38268-201ENSMUST00000195813 193 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm43521-201ENSMUST00000197838 255 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm43107-201ENSMUST00000198729 255 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm43393-201ENSMUST00000200147 194 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm43979-201ENSMUST00000203179 475 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm44208-201ENSMUST00000205199 421 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm17838-201ENSMUST00000205872 876 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm7675-201ENSMUST00000208828 686 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm18557-201ENSMUST00000218710 433 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.61□□□□□ -1.99
Cdc40Q9DC48 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm10025-201ENSMUST00000079568 372 ntBASIC2.61□□□□□ -1.99
Cdc40Q9DC48 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Snord14c-201ENSMUST00000101927 86 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Mir499-201ENSMUST00000102357 79 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm14448-201ENSMUST00000116383 210 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm15025-201ENSMUST00000118434 418 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm25270-201ENSMUST00000122606 138 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm22141-201ENSMUST00000157403 277 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm16289-201ENSMUST00000162079 183 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm27599-201ENSMUST00000183758 174 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm27527-201ENSMUST00000183903 99 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm29389-201ENSMUST00000191562 352 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm37732-201ENSMUST00000194377 316 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Gm44688-201ENSMUST00000209083 537 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Snora23-201ENSMUST00000082517 184 ntBASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Cdc40Q9DC48 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm13087-201ENSMUST00000118298 256 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Snrpert-201ENSMUST00000121967 279 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm23463-201ENSMUST00000122468 99 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm1989-201ENSMUST00000126244 636 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm23387-201ENSMUST00000158586 107 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm16236-201ENSMUST00000159588 379 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm22853-201ENSMUST00000174974 131 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm29658-201ENSMUST00000185404 230 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm6060-201ENSMUST00000188671 251 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm29553-201ENSMUST00000189692 279 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm38214-201ENSMUST00000192581 988 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm37993-201ENSMUST00000195301 988 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm43228-201ENSMUST00000200735 264 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm45687-201ENSMUST00000209454 155 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm45452-201ENSMUST00000210905 177 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Gm25126-201ENSMUST00000083343 102 ntBASIC2.59□□□□□ -1.99
Cdc40Q9DC48 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdc40Q9DC48 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm23911-201ENSMUST00000104596 134 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm2348-201ENSMUST00000108782 300 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm16171-201ENSMUST00000118004 324 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm14897-201ENSMUST00000118213 207 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm12071-201ENSMUST00000121968 469 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm17164-201ENSMUST00000169013 506 ntBASIC2.58□□□□□ -2
Cdc40Q9DC48 Gm22858-201ENSMUST00000174972 76 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms