Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm38281-201ENSMUST00000192301 315 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm43489-201ENSMUST00000196810 993 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm44274-201ENSMUST00000203417 256 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Mir21a-201ENSMUST00000083521 92 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.4□□□□□ -1.87
Ccdc39Q9D5Y1 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Mir599-201ENSMUST00000102378 88 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm13210-201ENSMUST00000121483 273 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm15065-201ENSMUST00000121699 273 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm23111-201ENSMUST00000122652 105 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm6265-201ENSMUST00000149263 231 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm22143-201ENSMUST00000157401 203 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm27942-201ENSMUST00000184669 101 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm28623-201ENSMUST00000187219 192 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm43407-201ENSMUST00000199816 317 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm46136-201ENSMUST00000214730 565 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.39□□□□□ -1.87
Ccdc39Q9D5Y1 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm12096-201ENSMUST00000121149 829 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm22960-201ENSMUST00000122517 104 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm25318-201ENSMUST00000122554 314 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm24958-201ENSMUST00000158009 97 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Mir6405-201ENSMUST00000184584 124 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm32222-201ENSMUST00000203296 298 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Gm24446-201ENSMUST00000083982 156 ntBASIC3.38□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm11429-201ENSMUST00000119089 144 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm14804-201ENSMUST00000122322 508 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm25280-201ENSMUST00000157269 101 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm24241-201ENSMUST00000157787 145 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm26401-201ENSMUST00000158502 76 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Mir3965-201ENSMUST00000175570 69 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Mir6916-201ENSMUST00000184514 63 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Npn2-202ENSMUST00000189275 235 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm28437-201ENSMUST00000190277 783 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm37523-201ENSMUST00000194901 412 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm35558-202ENSMUST00000221819 499 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm2544-201ENSMUST00000222702 756 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm21286-201ENSMUST00000098035 545 ntBASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc39Q9D5Y1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms