Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm23667-201ENSMUST00000157466 120 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm20542-201ENSMUST00000174582 372 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm25748-201ENSMUST00000175487 70 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm22716-201ENSMUST00000177596 107 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm4076-201ENSMUST00000179230 965 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm28163-201ENSMUST00000187099 325 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm28650-201ENSMUST00000188413 411 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm43239-201ENSMUST00000200131 201 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm32381-201ENSMUST00000203192 476 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm35931-201ENSMUST00000203931 448 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm30674-201ENSMUST00000214523 392 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Mir1193-201ENSMUST00000116761 121 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm11784-201ENSMUST00000118568 474 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm12156-201ENSMUST00000119188 554 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm16354-201ENSMUST00000155376 150 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm22390-201ENSMUST00000157588 325 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm23352-201ENSMUST00000158428 64 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm26005-201ENSMUST00000158802 134 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Mir3964-201ENSMUST00000174898 74 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Mir5127-201ENSMUST00000175295 71 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm27921-201ENSMUST00000183968 108 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm29641-201ENSMUST00000188955 259 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm28654-201ENSMUST00000189801 379 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm28648-201ENSMUST00000190092 343 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm8023-201ENSMUST00000195298 903 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm44657-201ENSMUST00000208568 450 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm39147-201ENSMUST00000211376 465 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm24533-201ENSMUST00000083138 196 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm23650-201ENSMUST00000083355 70 ntBASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Vps28Q9D1C8 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm25876-201ENSMUST00000104329 119 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm24403-201ENSMUST00000104616 130 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm13167-201ENSMUST00000118554 578 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm14810-201ENSMUST00000121628 486 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm25784-201ENSMUST00000122524 81 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm20698-201ENSMUST00000175657 233 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm21758-201ENSMUST00000179336 819 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm24137-201ENSMUST00000180055 79 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm24306-201ENSMUST00000180229 79 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm22391-201ENSMUST00000180356 79 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm19641-201ENSMUST00000188432 417 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm29647-201ENSMUST00000188795 666 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm20832-201ENSMUST00000189076 665 ntBASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.48□□□□□ -1.85
Vps28Q9D1C8 Gm28241-201ENSMUST00000190916 235 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms