Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm13510-201ENSMUST00000118659 429 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm15313-201ENSMUST00000119179 282 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm12787-201ENSMUST00000119234 396 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm11931-201ENSMUST00000121630 447 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm24550-201ENSMUST00000158648 279 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm27385-201ENSMUST00000184747 104 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm28615-201ENSMUST00000187527 482 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm28506-201ENSMUST00000189937 150 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm7468-201ENSMUST00000203900 652 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm5001-201ENSMUST00000204361 331 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 AC117202.3-201ENSMUST00000228532 310 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm25135-201ENSMUST00000082648 143 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm22507-201ENSMUST00000082773 160 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Mir370-201ENSMUST00000083499 79 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Ddx56Q9D0R4 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Ddx56Q9D0R4 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.15□□□□□ -1.74
Ddx56Q9D0R4 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Ddx56Q9D0R4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
Ddx56Q9D0R4 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ddx56Q9D0R4 Mir193b-201ENSMUST00000103784 79 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm23948-201ENSMUST00000104030 132 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm23481-201ENSMUST00000104173 131 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm15175-201ENSMUST00000117629 132 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm9043-201ENSMUST00000119677 314 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm24720-201ENSMUST00000157518 166 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm24959-201ENSMUST00000157924 146 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm7241-201ENSMUST00000159853 357 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm2862-201ENSMUST00000161524 328 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Mir6960-201ENSMUST00000183449 61 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm27828-201ENSMUST00000184108 119 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm42647-201ENSMUST00000195939 459 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ddx56Q9D0R4 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm24850-201ENSMUST00000158029 119 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm23862-201ENSMUST00000180342 94 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm27921-201ENSMUST00000183968 108 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm37029-201ENSMUST00000195773 239 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm8820-201ENSMUST00000204077 571 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm8745-201ENSMUST00000207846 782 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm45814-201ENSMUST00000212646 775 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Rny3-201ENSMUST00000083011 102 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm23242-201ENSMUST00000083055 107 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx56Q9D0R4 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ddx56Q9D0R4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ddx56Q9D0R4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ddx56Q9D0R4 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.13□□□□□ -1.75
Ddx56Q9D0R4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Ddx56Q9D0R4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms