Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
Ddx28Q9CWT6 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm11577-201ENSMUST00000118030 737 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm14293-201ENSMUST00000118528 577 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm15231-201ENSMUST00000119174 447 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm12433-201ENSMUST00000119659 255 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm12006-201ENSMUST00000120786 403 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm25105-201ENSMUST00000122477 130 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm25667-201ENSMUST00000157701 275 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm27161-201ENSMUST00000183960 562 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm29576-201ENSMUST00000188020 678 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm28354-201ENSMUST00000190904 678 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm31123-201ENSMUST00000192094 666 ntBASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx28Q9CWT6 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm14579-201ENSMUST00000117068 283 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm13046-201ENSMUST00000117391 501 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm13751-201ENSMUST00000120280 752 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm16005-201ENSMUST00000120515 269 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm15014-201ENSMUST00000120742 258 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Mir6385-201ENSMUST00000184295 105 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm5116-201ENSMUST00000187732 463 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm29627-201ENSMUST00000187984 463 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm37550-201ENSMUST00000193230 463 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm37428-201ENSMUST00000193886 137 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm44016-201ENSMUST00000203463 164 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm2676-201ENSMUST00000207279 606 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm45438-201ENSMUST00000210242 564 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm4036-201ENSMUST00000220842 626 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gm17890-201ENSMUST00000221419 757 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx28Q9CWT6 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm25727-201ENSMUST00000104522 131 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm11845-201ENSMUST00000117886 327 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm15030-201ENSMUST00000119804 484 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm23666-201ENSMUST00000158053 116 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm15946-201ENSMUST00000160654 423 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm20673-201ENSMUST00000177167 430 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Spin2g-201ENSMUST00000178425 687 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm25156-201ENSMUST00000179809 79 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm27028-201ENSMUST00000182303 399 ntBASIC3.19□□□□□ -1.9
Ddx28Q9CWT6 Gm28163-201ENSMUST00000187099 325 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms