Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm22322-201ENSMUST00000157151 111 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm22187-201ENSMUST00000157819 129 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm22839-201ENSMUST00000158436 304 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm26214-201ENSMUST00000158581 107 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Mir8096-201ENSMUST00000184526 127 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm28917-201ENSMUST00000187294 237 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm5268-201ENSMUST00000189212 940 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm28766-201ENSMUST00000191086 234 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm38280-201ENSMUST00000192610 158 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm44208-201ENSMUST00000205199 421 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Smc1aQ9CU62 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Smc1aQ9CU62 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm13329-201ENSMUST00000117063 265 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm13614-201ENSMUST00000117306 503 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm12656-201ENSMUST00000118149 577 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm13541-201ENSMUST00000119519 283 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm14238-201ENSMUST00000120227 323 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm16289-201ENSMUST00000162079 183 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm2966-201ENSMUST00000166052 481 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Mir3965-201ENSMUST00000175570 69 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21842-201ENSMUST00000177552 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21626-201ENSMUST00000177791 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21562-201ENSMUST00000177888 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21539-201ENSMUST00000177925 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm17522-201ENSMUST00000178144 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21599-201ENSMUST00000178249 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21914-201ENSMUST00000178452 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21723-201ENSMUST00000178692 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21916-201ENSMUST00000178771 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21801-201ENSMUST00000178865 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21633-201ENSMUST00000178941 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21821-201ENSMUST00000179646 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21588-201ENSMUST00000180074 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21780-201ENSMUST00000180128 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21572-201ENSMUST00000180134 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm21529-201ENSMUST00000180175 498 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm29370-202ENSMUST00000187476 499 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm7858-201ENSMUST00000190177 622 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Gm44399-201ENSMUST00000205043 226 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Mir421-201ENSMUST00000083575 76 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Smc1aQ9CU62 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm16171-201ENSMUST00000118004 324 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm24958-201ENSMUST00000158009 97 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm7582-201ENSMUST00000160831 603 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm29602-201ENSMUST00000186887 442 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm29288-201ENSMUST00000191582 901 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm43393-201ENSMUST00000200147 194 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm45105-201ENSMUST00000207824 397 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm26128-201ENSMUST00000083170 110 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Mir21a-201ENSMUST00000083521 92 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.32□□□□□ -1.88
Smc1aQ9CU62 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Smc1aQ9CU62 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.31□□□□□ -1.88
Smc1aQ9CU62 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms