Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Msh4Q99MT2 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msh4Q99MT2 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm23063-201ENSMUST00000102350 93 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm26075-201ENSMUST00000104062 121 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm14657-201ENSMUST00000117461 302 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm15988-201ENSMUST00000118677 367 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm6584-201ENSMUST00000119671 447 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm16428-201ENSMUST00000121193 723 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm22480-201ENSMUST00000122568 128 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm22219-201ENSMUST00000157562 319 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm24998-201ENSMUST00000157908 89 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Mir5129-201ENSMUST00000174938 78 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm22367-201ENSMUST00000178930 132 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm24518-201ENSMUST00000180275 94 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm37001-201ENSMUST00000193377 190 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm37239-201ENSMUST00000193510 141 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm9227-201ENSMUST00000194733 566 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm18429-201ENSMUST00000198707 421 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm42526-201ENSMUST00000198956 393 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm23093-201ENSMUST00000083450 102 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Msh4Q99MT2 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.6□□□□□ -1.83
Msh4Q99MT2 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Mir669l-201ENSMUST00000103771 98 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm11874-201ENSMUST00000117437 130 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm15613-201ENSMUST00000118396 326 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm11600-201ENSMUST00000119592 240 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm13511-201ENSMUST00000121167 363 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm14765-201ENSMUST00000121954 326 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm23332-201ENSMUST00000157424 275 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm24550-201ENSMUST00000158648 279 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm17162-201ENSMUST00000168538 473 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Mir5101-201ENSMUST00000175181 83 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm26556-201ENSMUST00000180645 320 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm9892-201ENSMUST00000182415 992 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm8600-201ENSMUST00000186320 905 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm21673-201ENSMUST00000186640 436 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm21135-201ENSMUST00000189023 436 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm29330-201ENSMUST00000190032 699 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm29192-201ENSMUST00000190942 377 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm38109-201ENSMUST00000195386 181 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 AL603630.1-201ENSMUST00000214781 147 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm23650-201ENSMUST00000083355 70 ntBASIC3.59□□□□□ -1.83
Msh4Q99MT2 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Msh4Q99MT2 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Msh4Q99MT2 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Msh4Q99MT2 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm25637-201ENSMUST00000157529 107 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm24505-201ENSMUST00000157682 126 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm25817-201ENSMUST00000177758 121 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm24766-201ENSMUST00000179182 121 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm21758-201ENSMUST00000179336 819 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.58□□□□□ -1.84
Msh4Q99MT2 Gm26746-201ENSMUST00000181722 487 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms