Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 n-R5s166-201ENSMUST00000082898 121 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 AF357428-201ENSMUST00000083815 69 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm22023-201ENSMUST00000104354 130 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm11898-201ENSMUST00000117161 385 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm14973-201ENSMUST00000117248 255 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm12721-201ENSMUST00000120621 268 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm7350-201ENSMUST00000120964 636 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm12819-201ENSMUST00000122223 629 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm12368-201ENSMUST00000122251 434 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm24900-201ENSMUST00000158128 134 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Mir7013-201ENSMUST00000183540 72 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm27379-201ENSMUST00000183730 123 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm19498-201ENSMUST00000191128 331 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm18692-201ENSMUST00000193047 511 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm43368-201ENSMUST00000200638 409 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm42474-201ENSMUST00000201073 505 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm44519-201ENSMUST00000206486 122 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm45409-201ENSMUST00000211486 252 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 AC117202.3-201ENSMUST00000228532 310 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Gm26439-201ENSMUST00000082592 106 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.85□□□□□ -2.11
Nup35Q8R4R6 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Nup35Q8R4R6 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm22488-201ENSMUST00000116811 127 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm24937-201ENSMUST00000122597 134 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm8292-201ENSMUST00000162574 396 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm17655-201ENSMUST00000167969 255 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm22367-201ENSMUST00000178930 132 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm27161-201ENSMUST00000183960 562 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm29604-201ENSMUST00000187176 163 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm29335-201ENSMUST00000188361 459 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm28779-201ENSMUST00000189678 323 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm17935-201ENSMUST00000196649 772 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm43224-201ENSMUST00000201567 898 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm7443-201ENSMUST00000206355 378 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 CT009713.6-201ENSMUST00000223615 294 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm22622-201ENSMUST00000082870 129 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Gm9218-201ENSMUST00000121068 2694 ntBASIC1.84□□□□□ -2.11
Nup35Q8R4R6 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm14794-201ENSMUST00000118181 192 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm15126-201ENSMUST00000118631 833 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm15936-201ENSMUST00000118706 460 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm13082-201ENSMUST00000118877 561 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm6071-201ENSMUST00000119561 440 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm14564-201ENSMUST00000122159 294 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm18448-201ENSMUST00000186286 599 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm7675-201ENSMUST00000208828 686 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm45395-201ENSMUST00000209891 559 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.83□□□□□ -2.12
Nup35Q8R4R6 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Nup35Q8R4R6 Gm23723-201ENSMUST00000082996 132 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms