Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm10088-201ENSMUST00000074116 423 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm26206-201ENSMUST00000082908 110 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Ccdc28bQ8CEG5 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.15□□□□□ -1.9
Ccdc28bQ8CEG5 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm11219-201ENSMUST00000118565 358 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm15268-201ENSMUST00000118845 352 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm12335-201ENSMUST00000119738 327 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm11420-201ENSMUST00000120047 402 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26276-201ENSMUST00000157099 109 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23981-201ENSMUST00000157136 106 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23540-201ENSMUST00000157543 164 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm15946-201ENSMUST00000160654 423 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Igkv17-134-201ENSMUST00000168310 348 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26219-201ENSMUST00000175216 71 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26177-201ENSMUST00000178683 107 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm19637-201ENSMUST00000185933 579 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm29064-201ENSMUST00000187014 813 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm20811-201ENSMUST00000190500 553 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm28552-201ENSMUST00000190725 388 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5551-201ENSMUST00000199720 690 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43899-201ENSMUST00000203675 246 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43884-201ENSMUST00000204251 559 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm45048-201ENSMUST00000207058 429 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm45049-201ENSMUST00000207586 591 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm20039-201ENSMUST00000210329 394 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm4987-201ENSMUST00000078326 408 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ccdc28bQ8CEG5 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23273-201ENSMUST00000104058 135 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm11456-201ENSMUST00000121070 256 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm5963-201ENSMUST00000143451 236 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm23755-201ENSMUST00000157578 343 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm25883-201ENSMUST00000157781 271 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22961-201ENSMUST00000157964 106 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22765-201ENSMUST00000158371 128 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22530-201ENSMUST00000158820 118 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm22532-201ENSMUST00000158822 140 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27317-201ENSMUST00000183533 95 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Mir8103-201ENSMUST00000183945 107 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm27539-201ENSMUST00000184971 224 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm37616-201ENSMUST00000193974 322 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm44910-201ENSMUST00000208451 396 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm18703-201ENSMUST00000215318 333 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm46233-201ENSMUST00000217831 449 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Gm2446-201ENSMUST00000220144 772 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ccdc28bQ8CEG5 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc28bQ8CEG5 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms