Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm29218-205ENSMUST00000190846 615 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm28978-201ENSMUST00000191120 615 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm28927-201ENSMUST00000191528 272 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm1833-201ENSMUST00000191608 682 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm37172-201ENSMUST00000191926 615 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm37007-201ENSMUST00000194234 319 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm19032-201ENSMUST00000208584 592 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm25586-201ENSMUST00000082499 112 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm22810-201ENSMUST00000082741 158 ntBASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Atg4aQ8C9S8 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm24120-201ENSMUST00000103978 129 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm25560-201ENSMUST00000104606 176 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm12268-201ENSMUST00000118398 442 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm7071-201ENSMUST00000120458 462 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm22236-201ENSMUST00000157093 106 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm23325-201ENSMUST00000157422 129 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm26045-201ENSMUST00000157862 97 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm17177-201ENSMUST00000169144 483 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm27796-201ENSMUST00000183863 261 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm28358-202ENSMUST00000189292 223 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm45048-201ENSMUST00000207058 429 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 AC162857.1-201ENSMUST00000226614 400 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm24610-201ENSMUST00000083270 109 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm25008-201ENSMUST00000083809 81 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.6□□□□□ -1.83
Atg4aQ8C9S8 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Mir693-201ENSMUST00000102187 89 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm12897-201ENSMUST00000120341 250 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm14915-201ENSMUST00000120747 204 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm22765-201ENSMUST00000158371 128 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm23619-201ENSMUST00000178411 94 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm25474-201ENSMUST00000179052 94 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm22047-201ENSMUST00000179176 94 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Mir7578-201ENSMUST00000183455 82 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm29184-201ENSMUST00000190038 334 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm28655-201ENSMUST00000191538 692 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm37817-201ENSMUST00000195276 434 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm43954-201ENSMUST00000204634 544 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm31849-201ENSMUST00000220306 375 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm46994-201ENSMUST00000221523 219 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Snord21-201ENSMUST00000082519 94 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm23738-201ENSMUST00000082828 171 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.59□□□□□ -1.83
Atg4aQ8C9S8 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.59□□□□□ -1.84
Atg4aQ8C9S8 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms