Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm24624-201ENSMUST00000082617 164 ntBASIC1.55□□□□□ -2.16
Ttc28Q80XJ3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm15933-201ENSMUST00000117215 616 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm26278-201ENSMUST00000157098 132 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm22116-201ENSMUST00000158791 141 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm20542-201ENSMUST00000174582 372 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm12876-201ENSMUST00000120975 408 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm24154-201ENSMUST00000175261 130 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.54□□□□□ -2.16
Ttc28Q80XJ3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 Mir7021-201ENSMUST00000197026 63 ntBASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 Gm10212-201ENSMUST00000087884 324 ntBASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ttc28Q80XJ3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.53□□□□□ -2.17
Ttc28Q80XJ3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.53□□□□□ -2.17
Ttc28Q80XJ3 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm13228-201ENSMUST00000118937 634 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm13627-201ENSMUST00000119700 706 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm14982-201ENSMUST00000121102 442 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm44277-201ENSMUST00000205128 649 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm9375-201ENSMUST00000208899 903 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Mir10b-201ENSMUST00000083566 68 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 AC124400.1-201ENSMUST00000225779 193 ntBASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ttc28Q80XJ3 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm6373-201ENSMUST00000121026 360 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm27468-201ENSMUST00000183577 106 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm38214-201ENSMUST00000192581 988 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm6112-201ENSMUST00000208037 629 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm44881-201ENSMUST00000205425 367 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.51□□□□□ -2.17
Ttc28Q80XJ3 Gm28974-201ENSMUST00000187893 231 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm22866-201ENSMUST00000083947 177 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm25416-201ENSMUST00000104221 107 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm13510-201ENSMUST00000118659 429 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm5937-201ENSMUST00000119715 643 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm19193-201ENSMUST00000190263 590 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm24313-201ENSMUST00000082561 133 ntBASIC1.5□□□□□ -2.17
Ttc28Q80XJ3 Gm22486-201ENSMUST00000116815 137 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm22083-201ENSMUST00000157586 102 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm22340-201ENSMUST00000157717 114 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm28724-202ENSMUST00000194218 295 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 AC153936.1-201ENSMUST00000219874 395 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Mir221-201ENSMUST00000083488 95 ntBASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Ttc28Q80XJ3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms