Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm44513-201ENSMUST00000206811 439 ntBASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Gm23650-201ENSMUST00000083355 70 ntBASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ubfd1Q78JW9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm15988-201ENSMUST00000118677 367 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm9043-201ENSMUST00000119677 314 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm25967-201ENSMUST00000157168 147 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm23068-201ENSMUST00000158239 293 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm21737-201ENSMUST00000178112 664 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm21815-201ENSMUST00000178213 664 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm20874-201ENSMUST00000178356 663 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm21744-201ENSMUST00000178403 662 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm20901-201ENSMUST00000180177 664 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm24518-201ENSMUST00000180275 94 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm21960-201ENSMUST00000181924 452 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm28628-201ENSMUST00000187006 264 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm21647-201ENSMUST00000189755 664 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm28337-201ENSMUST00000190425 666 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm37603-201ENSMUST00000192368 219 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm17781-201ENSMUST00000195232 649 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm24043-201ENSMUST00000083108 116 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ubfd1Q78JW9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm22656-201ENSMUST00000104199 171 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm2066-201ENSMUST00000118046 389 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm14638-201ENSMUST00000121338 216 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm25970-201ENSMUST00000157165 86 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm25624-201ENSMUST00000157222 275 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm22840-201ENSMUST00000158444 136 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm24546-201ENSMUST00000158652 102 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm7041-201ENSMUST00000201227 524 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm44475-201ENSMUST00000204041 424 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm19140-201ENSMUST00000209790 421 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm19219-201ENSMUST00000215863 724 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm24626-201ENSMUST00000082621 161 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.72□□□□□ -1.81
Ubfd1Q78JW9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 Gm22831-201ENSMUST00000102473 109 ntBASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 Gm12787-201ENSMUST00000119234 396 ntBASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 Gm5287-201ENSMUST00000120666 598 ntBASIC3.71□□□□□ -1.82
Ubfd1Q78JW9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms