Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm28141-201ENSMUST00000186676 342 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm28163-201ENSMUST00000187099 325 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm19641-201ENSMUST00000188432 417 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm38050-201ENSMUST00000191904 238 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm37692-201ENSMUST00000192633 232 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm43217-201ENSMUST00000199513 367 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm23515-201ENSMUST00000082829 107 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ddx55Q6ZPL9 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm14825-201ENSMUST00000113538 701 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm14594-201ENSMUST00000118052 537 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm14590-201ENSMUST00000118934 537 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm11254-201ENSMUST00000122368 653 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm25806-201ENSMUST00000122782 122 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm17159-201ENSMUST00000169043 482 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm24810-201ENSMUST00000175317 70 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm14596-201ENSMUST00000180268 537 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm14595-201ENSMUST00000180335 537 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm37399-201ENSMUST00000195224 416 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm45006-201ENSMUST00000206078 690 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm19126-201ENSMUST00000207896 509 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm45402-201ENSMUST00000211796 223 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm26228-201ENSMUST00000082512 107 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm25080-201ENSMUST00000082526 107 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Gm25518-201ENSMUST00000083864 107 ntBASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Ddx55Q6ZPL9 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm26396-201ENSMUST00000104093 132 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm14987-201ENSMUST00000117820 676 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm11598-201ENSMUST00000119257 357 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm14586-201ENSMUST00000119571 408 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm13273-201ENSMUST00000119737 159 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm24419-201ENSMUST00000157875 332 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm22434-201ENSMUST00000158549 122 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm24739-201ENSMUST00000158855 292 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm20693-201ENSMUST00000177431 211 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm22633-201ENSMUST00000179834 107 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm26189-201ENSMUST00000179879 107 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm27905-201ENSMUST00000184005 207 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm44016-201ENSMUST00000203463 164 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm7407-201ENSMUST00000208301 568 ntBASIC4.3□□□□□ -1.72
Ddx55Q6ZPL9 Gm45438-201ENSMUST00000210242 564 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms