Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Mir6541-201ENSMUST00000183649 110 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm18775-201ENSMUST00000190763 586 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm37845-201ENSMUST00000194977 355 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm7624-201ENSMUST00000209702 435 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm24292-201ENSMUST00000082888 107 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm23503-201ENSMUST00000083903 107 ntBASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Ddx58Q6Q899 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm23256-201ENSMUST00000102235 110 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm26140-201ENSMUST00000103807 110 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm14981-201ENSMUST00000117325 943 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm13751-201ENSMUST00000120280 752 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm24739-201ENSMUST00000158855 292 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Nron-204ENSMUST00000158971 370 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm24819-201ENSMUST00000175094 166 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm22716-201ENSMUST00000177596 107 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm22908-201ENSMUST00000177620 110 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm24100-201ENSMUST00000178592 79 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm28597-201ENSMUST00000187664 666 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Trbv22-201ENSMUST00000191697 291 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm43932-201ENSMUST00000204499 52 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm45232-201ENSMUST00000207811 162 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Ddx58Q6Q899 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm12640-201ENSMUST00000120097 310 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm13602-201ENSMUST00000122405 493 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm4076-201ENSMUST00000179230 965 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm28283-201ENSMUST00000185509 178 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm18900-201ENSMUST00000193218 584 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm37085-201ENSMUST00000193780 196 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm43489-201ENSMUST00000196810 993 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm44208-201ENSMUST00000205199 421 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx58Q6Q899 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ddx58Q6Q899 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.15□□□□□ -1.74
Ddx58Q6Q899 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.15□□□□□ -1.74
Ddx58Q6Q899 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.15□□□□□ -1.74
Ddx58Q6Q899 Gm23744-201ENSMUST00000104231 149 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm23791-201ENSMUST00000122553 293 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm23379-201ENSMUST00000180026 107 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm27999-201ENSMUST00000183539 193 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm19620-201ENSMUST00000195972 434 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm42475-201ENSMUST00000201212 295 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm44923-201ENSMUST00000206673 85 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm7948-201ENSMUST00000212607 844 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Gm2628-201ENSMUST00000218019 426 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ddx58Q6Q899 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ddx58Q6Q899 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ddx58Q6Q899 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms