Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Scaf4Q6PFF0 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scaf4Q6PFF0 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Scaf4Q6PFF0 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Scaf4Q6PFF0 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Scaf4Q6PFF0 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.33□□□□□ -1.72
Scaf4Q6PFF0 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm12808-201ENSMUST00000120597 404 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm11430-201ENSMUST00000121317 217 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm25883-201ENSMUST00000157781 271 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm23781-201ENSMUST00000157940 308 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm24898-201ENSMUST00000158133 106 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm26041-201ENSMUST00000158148 108 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm2389-201ENSMUST00000160487 189 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm17183-201ENSMUST00000171170 493 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm22243-201ENSMUST00000178754 120 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm24968-201ENSMUST00000179817 107 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm27355-201ENSMUST00000185045 128 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm29596-201ENSMUST00000185710 385 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm37568-201ENSMUST00000191755 364 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm43855-201ENSMUST00000197462 507 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm44521-201ENSMUST00000206469 217 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Scaf4Q6PFF0 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm25096-201ENSMUST00000104043 129 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm12719-201ENSMUST00000118859 241 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm14838-201ENSMUST00000118913 248 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm12118-201ENSMUST00000119766 532 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm12486-201ENSMUST00000120887 541 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm12226-201ENSMUST00000144172 876 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm17162-201ENSMUST00000168538 473 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm17153-201ENSMUST00000171314 490 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm29031-201ENSMUST00000185316 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm29000-201ENSMUST00000185444 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm28204-201ENSMUST00000185934 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm28290-201ENSMUST00000186505 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm28161-201ENSMUST00000186669 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm28749-209ENSMUST00000189599 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm33163-201ENSMUST00000194504 614 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm43730-201ENSMUST00000199863 372 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm42665-201ENSMUST00000202100 586 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm7676-201ENSMUST00000084055 319 ntBASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Scaf4Q6PFF0 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Synpr-207ENSMUST00000223583 3362 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm14296-202ENSMUST00000108931 750 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm14825-201ENSMUST00000113538 701 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm14512-201ENSMUST00000117924 230 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm15026-201ENSMUST00000119219 458 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm14067-201ENSMUST00000119340 314 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm12495-201ENSMUST00000119750 447 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm7840-201ENSMUST00000122086 533 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm13092-201ENSMUST00000136346 260 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Scaf4Q6PFF0 Gm22114-201ENSMUST00000177756 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms