Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm25339-201ENSMUST00000157458 232 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm22216-201ENSMUST00000157557 114 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm24847-201ENSMUST00000158032 108 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm23191-201ENSMUST00000179147 107 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm25361-201ENSMUST00000179358 76 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm27828-201ENSMUST00000184108 119 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm28163-201ENSMUST00000187099 325 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm9722-201ENSMUST00000194568 802 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Mir6375-201ENSMUST00000197176 95 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Olfr197-201ENSMUST00000080031 926 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm25579-201ENSMUST00000083407 106 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Mir34b-201ENSMUST00000083558 84 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sp140Q6NSQ5 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm26156-201ENSMUST00000116999 123 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm14897-201ENSMUST00000118213 207 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm11566-201ENSMUST00000118550 203 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm13831-201ENSMUST00000118764 302 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm15364-201ENSMUST00000119618 585 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm11403-201ENSMUST00000122195 369 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm24537-201ENSMUST00000157950 102 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm7925-201ENSMUST00000166690 401 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm28008-201ENSMUST00000184021 186 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm27490-201ENSMUST00000184754 128 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm30280-201ENSMUST00000192214 262 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm3010-201ENSMUST00000198805 448 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm8820-201ENSMUST00000204077 571 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm44703-201ENSMUST00000205724 248 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm45614-201ENSMUST00000209994 721 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Mir30e-201ENSMUST00000083475 92 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm23851-201ENSMUST00000083831 103 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Sp140Q6NSQ5 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm13085-201ENSMUST00000118356 171 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm13419-201ENSMUST00000121711 271 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm26476-201ENSMUST00000122618 313 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm22242-201ENSMUST00000175224 118 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm20673-201ENSMUST00000177167 430 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm22633-201ENSMUST00000179834 107 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm29229-201ENSMUST00000188874 323 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm7041-201ENSMUST00000201227 524 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm44092-201ENSMUST00000204470 258 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm44794-201ENSMUST00000206550 411 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm9309-201ENSMUST00000223537 546 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Sp140Q6NSQ5 Gm23443-201ENSMUST00000082916 128 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms