Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm16419-201ENSMUST00000221057 625 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CtcfQ61164 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
CtcfQ61164 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm25475-201ENSMUST00000082825 180 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CtcfQ61164 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CtcfQ61164 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm11854-201ENSMUST00000117839 446 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm14918-201ENSMUST00000118153 268 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm11352-201ENSMUST00000119264 517 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm12891-201ENSMUST00000119358 240 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm2005-201ENSMUST00000120759 542 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm22480-201ENSMUST00000122568 128 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm24061-201ENSMUST00000157489 120 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm27313-201ENSMUST00000183500 142 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Mir6905-201ENSMUST00000184228 70 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm37698-201ENSMUST00000192605 463 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm37239-201ENSMUST00000193510 141 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm38356-201ENSMUST00000194313 408 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm45366-201ENSMUST00000209828 384 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Gm10264-201ENSMUST00000220589 429 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CtcfQ61164 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CtcfQ61164 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CtcfQ61164 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.82□□□□□ -1.8
CtcfQ61164 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CtcfQ61164 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CtcfQ61164 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm24374-201ENSMUST00000104394 106 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm12878-201ENSMUST00000118744 332 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm13082-201ENSMUST00000118877 561 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm7308-201ENSMUST00000121087 447 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm26276-201ENSMUST00000157099 109 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm23435-201ENSMUST00000157183 156 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm26005-201ENSMUST00000158802 134 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Nron-204ENSMUST00000158971 370 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CtcfQ61164 Cfap61-214ENSMUST00000167179 183 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm25451-201ENSMUST00000177832 121 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm25873-201ENSMUST00000180317 107 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm27905-201ENSMUST00000184005 207 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CtcfQ61164 Gm43704-201ENSMUST00000196164 496 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm43114-201ENSMUST00000198298 343 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm7624-201ENSMUST00000209702 435 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CtcfQ61164 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.81□□□□□ -1.8
CtcfQ61164 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Mir132-201ENSMUST00000083603 66 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Olfr713-201ENSMUST00000098139 975 ntBASIC3.81□□□□□ -1.8
CtcfQ61164 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CtcfQ61164 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm24581-201ENSMUST00000103962 133 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm11268-201ENSMUST00000118347 267 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm12897-201ENSMUST00000120341 250 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm15147-201ENSMUST00000122263 483 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.8□□□□□ -1.8
CtcfQ61164 Gm25066-201ENSMUST00000158145 123 ntBASIC3.8□□□□□ -1.8
CtcfQ61164 Gm3370-201ENSMUST00000171785 500 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms