Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm34314-201ENSMUST00000203622 367 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm5317-201ENSMUST00000204445 847 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm7751-201ENSMUST00000212868 709 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm18252-203ENSMUST00000215855 757 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.72□□□□□ -1.97
Usf1Q61069 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Usf1Q61069 Gm4017-201ENSMUST00000084813 338 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Usf1Q61069 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Usf1Q61069 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.71□□□□□ -1.97
Usf1Q61069 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
Usf1Q61069 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Usf1Q61069 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Usf1Q61069 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Usf1Q61069 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm12656-201ENSMUST00000118149 577 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm12787-201ENSMUST00000119234 396 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm13574-201ENSMUST00000120482 394 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm7327-201ENSMUST00000120925 652 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm12706-201ENSMUST00000121588 698 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm14578-201ENSMUST00000122166 391 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm14129-201ENSMUST00000122436 291 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm22766-201ENSMUST00000158372 99 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm6395-201ENSMUST00000167639 691 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.71□□□□□ -1.98
Usf1Q61069 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm24816-201ENSMUST00000175311 151 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm44395-201ENSMUST00000197056 153 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Usf1Q61069 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm18015-201ENSMUST00000214879 316 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.71□□□□□ -1.98
Usf1Q61069 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.71□□□□□ -1.98
Usf1Q61069 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usf1Q61069 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usf1Q61069 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Usf1Q61069 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.71□□□□□ -1.98
Usf1Q61069 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Usf1Q61069 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Usf1Q61069 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usf1Q61069 Mir467h-201ENSMUST00000116759 121 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm15399-201ENSMUST00000118055 724 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm11253-201ENSMUST00000118486 201 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm12016-201ENSMUST00000119079 681 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm6664-201ENSMUST00000119138 468 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm15452-201ENSMUST00000119877 240 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm25280-201ENSMUST00000157269 101 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm23032-201ENSMUST00000157995 107 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Mir3076-201ENSMUST00000175415 60 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm25528-201ENSMUST00000180264 132 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.7□□□□□ -1.98
Usf1Q61069 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.7□□□□□ -1.98
Usf1Q61069 Gm38075-201ENSMUST00000191979 920 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm37732-201ENSMUST00000194377 316 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm37353-201ENSMUST00000194497 313 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm37523-201ENSMUST00000194901 412 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Usf1Q61069 Gm35931-201ENSMUST00000203931 448 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Usf1Q61069 Gm24622-201ENSMUST00000082619 162 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Gm26128-201ENSMUST00000083170 110 ntBASIC2.7□□□□□ -1.98
Usf1Q61069 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Usf1Q61069 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Usf1Q61069 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.69□□□□□ -1.98
Usf1Q61069 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Usf1Q61069 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.69□□□□□ -1.98
Usf1Q61069 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Usf1Q61069 Gm13239-201ENSMUST00000119920 637 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms