Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm7974-201ENSMUST00000117154 408 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm15900-201ENSMUST00000161584 342 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm29597-201ENSMUST00000188035 308 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm43345-201ENSMUST00000199484 269 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm44083-201ENSMUST00000203114 337 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm19252-201ENSMUST00000204705 305 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm5322-201ENSMUST00000206142 699 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 AC151902.1-201ENSMUST00000227800 375 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.53□□□□□ -2
Ccdc88aQ5SNZ0 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm12880-201ENSMUST00000120652 494 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22026-201ENSMUST00000122735 281 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm16359-201ENSMUST00000124511 289 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22716-201ENSMUST00000177596 107 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm37219-201ENSMUST00000192036 926 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm12935-201ENSMUST00000119352 246 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm11404-201ENSMUST00000120872 494 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22517-201ENSMUST00000158265 136 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm23005-201ENSMUST00000158950 136 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22093-201ENSMUST00000158980 111 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm27025-201ENSMUST00000182392 942 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm37418-201ENSMUST00000195031 274 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm43722-201ENSMUST00000196054 124 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Mir325-201ENSMUST00000083491 98 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Mir222-201ENSMUST00000083537 79 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm23846-201ENSMUST00000083835 107 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22444-201ENSMUST00000093693 108 ntBASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm15161-201ENSMUST00000117340 387 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm13080-201ENSMUST00000120556 420 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm13210-201ENSMUST00000121483 273 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm15065-201ENSMUST00000121699 273 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm24900-201ENSMUST00000158128 134 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Mir7039-201ENSMUST00000183852 85 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm9541-201ENSMUST00000188409 502 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm18340-201ENSMUST00000196342 609 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 AC135019.1-201ENSMUST00000219949 307 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm15951-201ENSMUST00000118377 400 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22107-201ENSMUST00000122548 100 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm26280-201ENSMUST00000157096 101 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm17183-201ENSMUST00000171170 493 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm21809-201ENSMUST00000178495 468 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm37550-201ENSMUST00000193230 463 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm45380-201ENSMUST00000210465 315 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm22072-201ENSMUST00000116850 121 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm12814-201ENSMUST00000117091 846 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm11890-201ENSMUST00000119585 417 ntBASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC2.5□□□□□ -2.01
Ccdc88aQ5SNZ0 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms