Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.06□□□□□ -2.08
Trav7d-4Q5R1H9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm25466-201ENSMUST00000103995 132 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm25727-201ENSMUST00000104522 131 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23609-201ENSMUST00000104542 127 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm14238-201ENSMUST00000120227 323 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm14506-201ENSMUST00000121165 536 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm7209-201ENSMUST00000122339 333 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm22563-201ENSMUST00000157333 269 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm25667-201ENSMUST00000157701 275 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm24008-201ENSMUST00000157733 138 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm24681-201ENSMUST00000158760 107 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Mir5129-201ENSMUST00000174938 78 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm27342-201ENSMUST00000183530 109 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm8392-201ENSMUST00000185647 835 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm28439-201ENSMUST00000187714 876 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm28802-201ENSMUST00000188624 944 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm32340-201ENSMUST00000192883 259 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm36943-201ENSMUST00000194422 282 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm45049-201ENSMUST00000207586 591 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm7624-201ENSMUST00000209702 435 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23925-201ENSMUST00000082471 132 ntBASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm14825-201ENSMUST00000113538 701 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm11268-201ENSMUST00000118347 267 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm14358-201ENSMUST00000118458 403 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm15799-201ENSMUST00000120899 289 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm25295-201ENSMUST00000122794 306 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm12238-201ENSMUST00000127764 124 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm13194-201ENSMUST00000142299 311 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm24505-201ENSMUST00000157682 126 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm17065-201ENSMUST00000165245 239 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm20718-201ENSMUST00000176058 259 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm23190-201ENSMUST00000180307 64 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm27942-201ENSMUST00000184669 101 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm29288-201ENSMUST00000191582 901 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm19457-201ENSMUST00000200995 448 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm44084-201ENSMUST00000203947 409 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm46193-201ENSMUST00000219399 364 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm22575-201ENSMUST00000082981 110 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm24533-201ENSMUST00000083138 196 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Mir421-201ENSMUST00000083575 76 ntBASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trav7d-4Q5R1H9 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms