Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mir8118-201ENSMUST00000183962 129 ntBASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm9541-201ENSMUST00000188409 502 ntBASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm28169-201ENSMUST00000190342 345 ntBASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm42465-201ENSMUST00000197036 492 ntBASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm6590-201ENSMUST00000203343 687 ntBASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Trav5d-4Q5R1F6 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm25407-201ENSMUST00000104102 134 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm2288-201ENSMUST00000118560 638 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm15106-201ENSMUST00000119691 821 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm16017-201ENSMUST00000119834 208 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm25866-201ENSMUST00000158245 112 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm26701-201ENSMUST00000181571 234 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm43722-201ENSMUST00000196054 124 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm43541-201ENSMUST00000197208 581 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm42474-201ENSMUST00000201073 505 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm43600-201ENSMUST00000202134 223 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm26494-201ENSMUST00000083154 143 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Gm24493-201ENSMUST00000083805 143 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.02□□□□□ -2.09
Trav5d-4Q5R1F6 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm6913-201ENSMUST00000100019 348 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm11898-201ENSMUST00000117161 385 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm22718-201ENSMUST00000122701 315 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm27869-201ENSMUST00000184327 122 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm7858-201ENSMUST00000190177 622 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm44665-201ENSMUST00000205381 251 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm25628-201ENSMUST00000084002 105 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm10343-201ENSMUST00000096279 348 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.01□□□□□ -2.09
Trav5d-4Q5R1F6 Gm18751-201ENSMUST00000185777 2013 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm14020-201ENSMUST00000118165 662 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm15126-201ENSMUST00000118631 833 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm12368-201ENSMUST00000122251 434 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm12443-201ENSMUST00000122308 323 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm22534-201ENSMUST00000158173 104 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm6788-201ENSMUST00000166459 270 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm7346-201ENSMUST00000169661 476 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Mir6353-201ENSMUST00000183596 113 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm27161-201ENSMUST00000183960 562 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Mir6916-201ENSMUST00000184514 63 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm29299-201ENSMUST00000185609 923 ntBASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5d-4Q5R1F6 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms