Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm15029-201ENSMUST00000119742 199 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm11325-201ENSMUST00000119967 469 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm24594-201ENSMUST00000122502 99 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm23887-201ENSMUST00000122683 172 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm26490-201ENSMUST00000157879 140 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm22326-201ENSMUST00000158897 351 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm3191-201ENSMUST00000167139 346 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm23571-201ENSMUST00000180073 127 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm27476-201ENSMUST00000183366 104 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Mir6917-201ENSMUST00000184111 61 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Mir7050-201ENSMUST00000184636 60 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm6796-201ENSMUST00000211919 243 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm46190-201ENSMUST00000219650 427 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Apoo-ps-201ENSMUST00000061241 586 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm25987-201ENSMUST00000083234 107 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm42991-201ENSMUST00000196468 3837 ntBASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm24671-201ENSMUST00000104159 158 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm24376-201ENSMUST00000104399 127 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm25923-201ENSMUST00000158312 138 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm16303-201ENSMUST00000161498 390 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm24487-201ENSMUST00000178017 63 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm28314-201ENSMUST00000191276 345 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm4045-201ENSMUST00000204076 310 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 AC187103.4-202ENSMUST00000225091 230 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm23927-201ENSMUST00000082466 215 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm23454-201ENSMUST00000083332 133 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Gm36931-201ENSMUST00000192997 4801 ntBASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Trim41Q5NCC3 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm11819-201ENSMUST00000122192 372 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm22113-201ENSMUST00000158343 104 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm24006-201ENSMUST00000158462 132 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 AC151902.2-201ENSMUST00000226419 301 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm23239-201ENSMUST00000083006 181 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm37363-201ENSMUST00000192336 2233 ntBASIC8.34□□□□□ -1.07
Trim41Q5NCC3 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Trim41Q5NCC3 Gm31258-201ENSMUST00000194532 3297 ntBASIC8.34□□□□□ -1.08
Trim41Q5NCC3 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim41Q5NCC3 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm6645-201ENSMUST00000118505 2726 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm38248-201ENSMUST00000193744 5783 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Mir599-201ENSMUST00000102378 88 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 AA413626-201ENSMUST00000121125 494 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm14581-201ENSMUST00000121726 198 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm22345-201ENSMUST00000122644 107 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm20542-201ENSMUST00000174582 372 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm29031-201ENSMUST00000185316 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm29000-201ENSMUST00000185444 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm28204-201ENSMUST00000185934 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm28290-201ENSMUST00000186505 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm28161-201ENSMUST00000186669 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm28749-209ENSMUST00000189599 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm36946-201ENSMUST00000192706 435 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm33163-201ENSMUST00000194504 614 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm44881-201ENSMUST00000205425 367 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm44816-201ENSMUST00000206666 477 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm18320-201ENSMUST00000211304 595 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 AC124562.1-201ENSMUST00000224673 337 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC8.33□□□□□ -1.08
Trim41Q5NCC3 AC158395.1-201ENSMUST00000227206 452 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Gm23455-201ENSMUST00000083331 100 ntBASIC8.33□□□□□ -1.08
Trim41Q5NCC3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 158.1 ms