Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm22306-201ENSMUST00000082692 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26331-201ENSMUST00000082824 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25698-201ENSMUST00000082897 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24205-201ENSMUST00000082953 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22505-201ENSMUST00000082956 108 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25405-201ENSMUST00000082973 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22628-201ENSMUST00000082988 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22363-201ENSMUST00000083100 108 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26496-201ENSMUST00000083150 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24458-201ENSMUST00000083204 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23814-201ENSMUST00000083230 102 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23815-201ENSMUST00000083231 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25790-201ENSMUST00000083293 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22295-201ENSMUST00000083311 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25127-201ENSMUST00000083336 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25583-201ENSMUST00000083413 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24414-201ENSMUST00000083434 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23095-201ENSMUST00000083446 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24803-201ENSMUST00000083693 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22580-201ENSMUST00000083727 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24260-201ENSMUST00000083741 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22682-201ENSMUST00000083854 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25869-201ENSMUST00000083855 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24693-201ENSMUST00000083885 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26317-201ENSMUST00000083894 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22798-201ENSMUST00000083992 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26427-201ENSMUST00000093648 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22444-201ENSMUST00000093693 108 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22170-201ENSMUST00000097247 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22486-201ENSMUST00000116815 137 ntBASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Gm12706-201ENSMUST00000121588 698 ntBASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22228-201ENSMUST00000157364 101 ntBASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Gm37054-201ENSMUST00000193481 543 ntBASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Gm42960-201ENSMUST00000202160 241 ntBASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 AC126690.1-201ENSMUST00000228898 397 ntBASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc88bQ4QRL3 Gm14882-201ENSMUST00000117216 218 ntBASIC2.99□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23470-201ENSMUST00000157129 120 ntBASIC2.99□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22554-201ENSMUST00000157798 147 ntBASIC2.99□□□□□ -1.93
Ccdc88bQ4QRL3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Ccdc88bQ4QRL3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.99□□□□□ -1.93
Ccdc88bQ4QRL3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Mir7021-201ENSMUST00000197026 63 ntBASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Gm2691-201ENSMUST00000203205 901 ntBASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Gm44881-201ENSMUST00000205425 367 ntBASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.98□□□□□ -1.93
Ccdc88bQ4QRL3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25555-201ENSMUST00000158078 111 ntBASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm27155-201ENSMUST00000183716 898 ntBASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm44458-201ENSMUST00000196594 143 ntBASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm10997-201ENSMUST00000210294 1500 ntBASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.97□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22469-201ENSMUST00000104118 133 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm9009-201ENSMUST00000117321 326 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23183-201ENSMUST00000122595 323 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm19123-201ENSMUST00000190716 651 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm28155-201ENSMUST00000191066 151 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm18861-201ENSMUST00000202509 1186 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Gm3690-201ENSMUST00000211341 262 ntBASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
Ccdc88bQ4QRL3 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Gm14020-201ENSMUST00000118165 662 ntBASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Gm12230-201ENSMUST00000118301 454 ntBASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Gm8151-201ENSMUST00000184817 871 ntBASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.96□□□□□ -1.94
Ccdc88bQ4QRL3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm12891-201ENSMUST00000119358 240 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm15452-201ENSMUST00000119877 240 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm6486-201ENSMUST00000166202 434 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm17186-201ENSMUST00000171742 456 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Mir6240-201ENSMUST00000184281 117 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm18433-201ENSMUST00000192747 197 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm37428-201ENSMUST00000193886 137 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.95□□□□□ -1.94
Ccdc88bQ4QRL3 Mir148b-201ENSMUST00000083626 97 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms