Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm27698-201ENSMUST00000184060 249 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Mir6943-201ENSMUST00000185186 66 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm4987-201ENSMUST00000078326 408 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Mir132-201ENSMUST00000083603 66 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
Trim40Q3UWA4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm8858-201ENSMUST00000118259 342 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm12954-201ENSMUST00000118610 611 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm14887-201ENSMUST00000119522 663 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm12213-201ENSMUST00000119924 353 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm22059-201ENSMUST00000157544 104 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm26362-201ENSMUST00000158865 315 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm20534-201ENSMUST00000172957 172 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm27999-201ENSMUST00000183539 193 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm28925-201ENSMUST00000188586 168 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm6651-201ENSMUST00000189471 271 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm43556-201ENSMUST00000196186 681 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm19649-201ENSMUST00000201126 822 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm7119-201ENSMUST00000221345 695 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Gm26206-201ENSMUST00000082908 110 ntBASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim40Q3UWA4 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm7853-201ENSMUST00000100708 478 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm25169-201ENSMUST00000104190 129 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm15783-201ENSMUST00000117521 633 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm11490-201ENSMUST00000118128 272 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm15988-201ENSMUST00000118677 367 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm14240-201ENSMUST00000120353 546 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm13720-201ENSMUST00000120741 196 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm11430-201ENSMUST00000121317 217 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm14101-201ENSMUST00000121502 473 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm14129-201ENSMUST00000122436 291 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm23212-201ENSMUST00000122718 60 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm25365-201ENSMUST00000158852 121 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm26141-201ENSMUST00000175299 126 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Mir6382-201ENSMUST00000184055 110 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm27163-201ENSMUST00000184767 409 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm4854-201ENSMUST00000185902 574 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm5268-201ENSMUST00000189212 940 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm37281-201ENSMUST00000192412 439 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm37692-201ENSMUST00000192633 232 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm43224-201ENSMUST00000201567 898 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm45105-201ENSMUST00000207824 397 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm45023-201ENSMUST00000207951 379 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Gm7984-201ENSMUST00000060640 538 ntBASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trim40Q3UWA4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms