Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Mir879-201ENSMUST00000104703 76 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm15148-201ENSMUST00000117602 156 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm8129-201ENSMUST00000118230 213 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm12618-201ENSMUST00000121754 483 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm34768-201ENSMUST00000193884 565 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Mir465d-201ENSMUST00000196314 58 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm9332-201ENSMUST00000198431 730 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm4083-201ENSMUST00000207158 451 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm26314-201ENSMUST00000083891 107 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.47□□□□□ -1.53
Rnf40Q3U319 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Rnf40Q3U319 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Rnf40Q3U319 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Rnf40Q3U319 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Rnf40Q3U319 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Rnf40Q3U319 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.46□□□□□ -1.54
Rnf40Q3U319 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm14874-201ENSMUST00000118995 438 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm14748-201ENSMUST00000119819 411 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm11334-201ENSMUST00000121969 156 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm22654-201ENSMUST00000157874 105 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Mir5129-201ENSMUST00000174938 78 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Mir5110-201ENSMUST00000175537 87 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Mir21b-201ENSMUST00000184317 108 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm28353-201ENSMUST00000186482 570 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm28533-201ENSMUST00000186741 570 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm19195-201ENSMUST00000222018 511 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm8508-201ENSMUST00000061226 363 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Gm23502-201ENSMUST00000083902 145 ntBASIC5.46□□□□□ -1.54
Rnf40Q3U319 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Rnf40Q3U319 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm13992-201ENSMUST00000120558 156 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm24435-201ENSMUST00000157886 110 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm22518-201ENSMUST00000158267 68 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm24084-201ENSMUST00000175173 137 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm16404-201ENSMUST00000177739 468 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm6660-201ENSMUST00000179149 468 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm14598-201ENSMUST00000180109 468 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm14625-201ENSMUST00000180231 468 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm19427-201ENSMUST00000183619 208 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Mir8106-201ENSMUST00000184520 139 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm27653-201ENSMUST00000185037 136 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm6003-201ENSMUST00000187903 463 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Gm26495-201ENSMUST00000083152 137 ntBASIC5.45□□□□□ -1.54
Rnf40Q3U319 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Rnf40Q3U319 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm12902-201ENSMUST00000118389 322 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm15765-201ENSMUST00000118407 910 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm11785-201ENSMUST00000120165 601 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm16218-201ENSMUST00000155424 388 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm24402-201ENSMUST00000157873 91 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm25162-201ENSMUST00000158906 159 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm24666-201ENSMUST00000158937 167 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm20620-201ENSMUST00000177528 168 ntBASIC5.44□□□□□ -1.54
Rnf40Q3U319 Gm24308-201ENSMUST00000177773 114 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms