Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 CT009713.9-201ENSMUST00000223604 389 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm7984-201ENSMUST00000060640 538 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm24268-201ENSMUST00000082990 110 ntBASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ddb1Q3U1J4 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm6373-201ENSMUST00000121026 360 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm23167-201ENSMUST00000157155 103 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm27028-201ENSMUST00000182303 399 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Mir7093-201ENSMUST00000184195 101 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm27588-201ENSMUST00000185096 263 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm42621-201ENSMUST00000198114 275 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm44720-201ENSMUST00000206076 260 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm16419-201ENSMUST00000221057 625 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.63□□□□□ -1.67
Ddb1Q3U1J4 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm14811-201ENSMUST00000117070 117 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm14880-201ENSMUST00000117581 292 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm14541-201ENSMUST00000118985 157 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm13064-201ENSMUST00000119125 557 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm6797-201ENSMUST00000119440 512 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm14714-201ENSMUST00000119743 439 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm15899-201ENSMUST00000128586 238 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm12226-201ENSMUST00000144172 876 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm4222-201ENSMUST00000165784 470 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm26335-201ENSMUST00000178449 107 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm23144-201ENSMUST00000180226 107 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm28500-201ENSMUST00000190286 151 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm19649-201ENSMUST00000201126 822 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm4987-201ENSMUST00000078326 408 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Gm24043-201ENSMUST00000083108 116 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Mir215-201ENSMUST00000083628 112 ntBASIC4.62□□□□□ -1.67
Ddb1Q3U1J4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm21737-201ENSMUST00000178112 664 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm21815-201ENSMUST00000178213 664 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm20874-201ENSMUST00000178356 663 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm21744-201ENSMUST00000178403 662 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm25156-201ENSMUST00000179809 79 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm20901-201ENSMUST00000180177 664 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm27374-201ENSMUST00000183660 81 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm21647-201ENSMUST00000189755 664 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm32340-201ENSMUST00000192883 259 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm22977-201ENSMUST00000082615 107 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm24765-201ENSMUST00000083691 103 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Ddb1Q3U1J4 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ddb1Q3U1J4 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms