Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm26497-201ENSMUST00000083146 107 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm8074-201ENSMUST00000095071 252 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col8a1Q00780 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col8a1Q00780 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col8a1Q00780 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col8a1Q00780 Mir743b-201ENSMUST00000104751 77 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm12311-201ENSMUST00000118803 374 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm23463-201ENSMUST00000122468 99 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm13092-201ENSMUST00000136346 260 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm24690-201ENSMUST00000157759 97 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm25555-201ENSMUST00000158078 111 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm22114-201ENSMUST00000177756 107 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm43814-201ENSMUST00000197851 413 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col8a1Q00780 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.88□□□□□ -1.79
Col8a1Q00780 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.88□□□□□ -1.79
Col8a1Q00780 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm5670-201ENSMUST00000093546 372 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.88□□□□□ -1.79
Col8a1Q00780 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Col8a1Q00780 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col8a1Q00780 AC149588.1-201ENSMUST00000228274 3745 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col8a1Q00780 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col8a1Q00780 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm14825-201ENSMUST00000113538 701 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm12261-201ENSMUST00000117499 645 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm2066-201ENSMUST00000118046 389 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm12820-201ENSMUST00000119233 342 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm14303-201ENSMUST00000121320 171 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.87□□□□□ -1.79
Col8a1Q00780 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm22598-201ENSMUST00000157600 127 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm23865-201ENSMUST00000157723 97 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm24191-201ENSMUST00000157977 122 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm22389-201ENSMUST00000158193 301 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm25264-201ENSMUST00000158519 117 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm24553-201ENSMUST00000158653 131 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm24664-201ENSMUST00000158939 100 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col8a1Q00780 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Mir6408-201ENSMUST00000183643 91 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm28471-201ENSMUST00000185994 615 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm38270-201ENSMUST00000192721 407 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.87□□□□□ -1.79
Col8a1Q00780 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.87□□□□□ -1.79
Col8a1Q00780 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Col8a1Q00780 Gm12080-201ENSMUST00000119821 1883 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.87□□□□□ -1.79
Col8a1Q00780 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col8a1Q00780 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Col8a1Q00780 AC122317.3-201ENSMUST00000219320 3524 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Col8a1Q00780 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col8a1Q00780 Mir881-201ENSMUST00000104844 78 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm14627-201ENSMUST00000118931 567 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm12647-201ENSMUST00000118977 265 ntBASIC3.86□□□□□ -1.79
Col8a1Q00780 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms