Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Hoxc11P31313 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hoxc11P31313 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hoxc11P31313 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hoxc11P31313 Gm24626-201ENSMUST00000082621 161 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 Snora7a-201ENSMUST00000082629 140 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 Snord38a-201ENSMUST00000083746 71 ntBASIC3.61□□□□□ -1.83
Hoxc11P31313 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Hoxc11P31313 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxc11P31313 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Hoxc11P31313 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm8244-201ENSMUST00000121254 264 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm14768-201ENSMUST00000122126 678 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm22988-201ENSMUST00000122759 144 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm25807-201ENSMUST00000122783 305 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm26101-201ENSMUST00000157246 105 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm24190-201ENSMUST00000157976 216 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm15946-201ENSMUST00000160654 423 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm19637-201ENSMUST00000185933 579 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm44041-201ENSMUST00000203678 396 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm44818-201ENSMUST00000206608 358 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Gm45588-201ENSMUST00000211213 630 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Olfr936-202ENSMUST00000216912 937 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Hoxc11P31313 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hoxc11P31313 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.6□□□□□ -1.83
Hoxc11P31313 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hoxc11P31313 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxc11P31313 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxc11P31313 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm13831-201ENSMUST00000118764 302 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm12693-201ENSMUST00000121965 483 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm12238-201ENSMUST00000127764 124 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm22320-201ENSMUST00000157149 312 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm27660-201ENSMUST00000184028 208 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm17946-201ENSMUST00000186856 538 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm28650-201ENSMUST00000188413 411 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm37771-201ENSMUST00000193121 265 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Trbv8-201ENSMUST00000194020 285 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm44961-201ENSMUST00000207450 196 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm18921-201ENSMUST00000221798 366 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm5265-201ENSMUST00000076828 342 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hoxc11P31313 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.59□□□□□ -1.83
Hoxc11P31313 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Hoxc11P31313 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Hoxc11P31313 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.59□□□□□ -1.84
Hoxc11P31313 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.59□□□□□ -1.84
Hoxc11P31313 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.59□□□□□ -1.84
Hoxc11P31313 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hoxc11P31313 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxc11P31313 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Hoxc11P31313 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.58□□□□□ -1.84
Hoxc11P31313 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxc11P31313 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Hoxc11P31313 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm23697-201ENSMUST00000103897 110 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm14570-201ENSMUST00000119444 391 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm11704-201ENSMUST00000120031 214 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm14739-201ENSMUST00000120424 802 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm25107-201ENSMUST00000122472 129 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.58□□□□□ -1.84
Hoxc11P31313 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm24240-201ENSMUST00000157785 135 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm24439-201ENSMUST00000157894 117 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm27163-201ENSMUST00000184767 409 ntBASIC3.58□□□□□ -1.84
Hoxc11P31313 Gm8600-201ENSMUST00000186320 905 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms