Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
P20040 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm23175-201ENSMUST00000104371 132 ntBASIC2.6□□□□□ -1.99
P20040 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.6□□□□□ -1.99
P20040 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.6□□□□□ -1.99
P20040 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.6□□□□□ -1.99
P20040 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.6□□□□□ -1.99
P20040 Gm24190-201ENSMUST00000157976 216 ntBASIC2.6□□□□□ -1.99
P20040 Gm16289-201ENSMUST00000162079 183 ntBASIC2.6□□□□□ -1.99
P20040 Gm21842-201ENSMUST00000177552 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21626-201ENSMUST00000177791 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.6□□□□□ -1.99
P20040 Gm21562-201ENSMUST00000177888 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21539-201ENSMUST00000177925 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm17522-201ENSMUST00000178144 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21599-201ENSMUST00000178249 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm21914-201ENSMUST00000178452 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm21723-201ENSMUST00000178692 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21916-201ENSMUST00000178771 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21801-201ENSMUST00000178865 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21633-201ENSMUST00000178941 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm21821-201ENSMUST00000179646 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.6□□□□□ -1.99
P20040 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.6□□□□□ -1.99
P20040 Gm21588-201ENSMUST00000180074 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21780-201ENSMUST00000180128 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21572-201ENSMUST00000180134 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm21529-201ENSMUST00000180175 498 ntBASIC2.6□□□□□ -1.99
P20040 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.6□□□□□ -1.99
P20040 Gm29370-202ENSMUST00000187476 499 ntBASIC2.6□□□□□ -1.99
P20040 Gm7858-201ENSMUST00000190177 622 ntBASIC2.6□□□□□ -1.99
P20040 Gm37692-201ENSMUST00000192633 232 ntBASIC2.6□□□□□ -1.99
P20040 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.6□□□□□ -1.99
P20040 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.6□□□□□ -1.99
P20040 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.6□□□□□ -1.99
P20040 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.6□□□□□ -1.99
P20040 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.6□□□□□ -1.99
P20040 Gm45192-201ENSMUST00000206749 283 ntBASIC2.6□□□□□ -1.99
P20040 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
P20040 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.6□□□□□ -1.99
P20040 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
P20040 Gm2544-201ENSMUST00000222702 756 ntBASIC2.6□□□□□ -1.99
P20040 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
P20040 Gm25131-201ENSMUST00000082653 151 ntBASIC2.6□□□□□ -1.99
P20040 Gm24446-201ENSMUST00000083982 156 ntBASIC2.6□□□□□ -1.99
P20040 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.6□□□□□ -1.99
P20040 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
P20040 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.6□□□□□ -1.99
P20040 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
P20040 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.59□□□□□ -1.99
P20040 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
P20040 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
P20040 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
P20040 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.59□□□□□ -1.99
P20040 Gm15399-201ENSMUST00000118055 724 ntBASIC2.59□□□□□ -1.99
P20040 Gm12412-201ENSMUST00000121867 328 ntBASIC2.59□□□□□ -1.99
P20040 Gm24787-201ENSMUST00000157380 123 ntBASIC2.59□□□□□ -1.99
P20040 Gm25334-201ENSMUST00000158036 110 ntBASIC2.59□□□□□ -1.99
P20040 Gm24552-201ENSMUST00000158646 103 ntBASIC2.59□□□□□ -1.99
P20040 Gm25490-201ENSMUST00000158734 130 ntBASIC2.59□□□□□ -1.99
P20040 Gm25470-201ENSMUST00000175576 111 ntBASIC2.59□□□□□ -1.99
P20040 Gm20651-201ENSMUST00000177219 329 ntBASIC2.59□□□□□ -1.99
P20040 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
P20040 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
P20040 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.59□□□□□ -1.99
P20040 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.59□□□□□ -1.99
P20040 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.59□□□□□ -1.99
P20040 Gm18982-201ENSMUST00000198118 529 ntBASIC2.59□□□□□ -1.99
P20040 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.59□□□□□ -1.99
P20040 Gm44157-201ENSMUST00000204720 410 ntBASIC2.59□□□□□ -1.99
P20040 Gm45513-201ENSMUST00000210228 376 ntBASIC2.59□□□□□ -1.99
P20040 Gm45400-201ENSMUST00000211603 653 ntBASIC2.59□□□□□ -1.99
P20040 Gm45860-201ENSMUST00000212700 334 ntBASIC2.59□□□□□ -1.99
P20040 Gm9370-201ENSMUST00000222787 609 ntBASIC2.59□□□□□ -1.99
P20040 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.59□□□□□ -1.99
P20040 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
P20040 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
P20040 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
P20040 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.58□□□□□ -2
P20040 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
P20040 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
P20040 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
P20040 Mir883a-201ENSMUST00000104824 76 ntBASIC2.58□□□□□ -2
P20040 Gm13504-201ENSMUST00000117490 316 ntBASIC2.58□□□□□ -2
P20040 Gm11219-201ENSMUST00000118565 358 ntBASIC2.58□□□□□ -2
P20040 Gm12723-201ENSMUST00000120700 451 ntBASIC2.58□□□□□ -2
P20040 Gm26027-201ENSMUST00000122725 268 ntBASIC2.58□□□□□ -2
P20040 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
P20040 Gm6265-201ENSMUST00000149263 231 ntBASIC2.58□□□□□ -2
P20040 Gm24736-201ENSMUST00000158862 130 ntBASIC2.58□□□□□ -2
P20040 Gm28637-201ENSMUST00000179424 345 ntBASIC2.58□□□□□ -2
P20040 Gm27698-201ENSMUST00000184060 249 ntBASIC2.58□□□□□ -2
P20040 Gm21489-201ENSMUST00000189668 818 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms